170d
;SOLUTION STRUCTURE OF A DNA DODECAMER CONTAINING THE ANTI-NEOPLASTIC AGENT ARABINOSYLCYTOSINE: COMBINED USE OF NMR, RESTRAINED MOLECULAR DYNAMICS AND FULL RELAXATION MATRIX REFINEMENT ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 170d |
| deposition_date | 1994-03-14 |
| title | ;SOLUTION STRUCTURE OF A DNA DODECAMER CONTAINING THE ANTI-NEOPLASTIC AGENT ARABINOSYLCYTOSINE: COMBINED USE OF NMR, RESTRAINED MOLECULAR DYNAMICS AND FULL RELAXATION MATRIX REFINEMENT ; |
| keywords | DNA; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 14.30 Å |
| rg_electron | 13.84 Å |
| i0 | 2798290.00 |
| molecular_weight | 7345.0 kDa |
| excluded_volume | 7089 ų |
| envelope_volume | 10216 ų |
| shell_volume | 7022 ų |
| envelope_diameter | 47.5 Å |
| shell_rg | 17.62 Å |
| envelope_rg | 13.96 Å |
| shape_rg | 13.72 Å |
| total_rg | 14.57 Å |
| total_atoms | 760 |
| n_residues | 22 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 47.9 Å |
| rg_real | 14.36 Å |
| rg_real_error | 0.42 Å |
| i0_real | 2.7980e+06 |
| i0_real_error | 3.3450e+04 |
| rg_reciprocal | 14.36 Å |
| i0_reciprocal | 2798000.0000 |
| total_estimate | 0.6896 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 12.7 Å |
| skewness | 0.355 |
| kurtosis | -0.477 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 189300.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.836; Stabil: 1.000; Sysdev: 0.256; Positv: 1.000; Valcen: 0.780; Smooth: 0.904 |