1afz
;SOLUTION NMR STRUCTURE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE FROM THE HUMAN N-RAS PROTOONCOGENE ENCODING FOR AMINO ACIDS 11-13 OF P21, MINIMIZED AVERAGE STRUCTURE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1afz |
| deposition_date | 1997-03-18 |
| title | ;SOLUTION NMR STRUCTURE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE FROM THE HUMAN N-RAS PROTOONCOGENE ENCODING FOR AMINO ACIDS 11-13 OF P21, MINIMIZED AVERAGE STRUCTURE ; |
| keywords | DNA DUPLEX, HUMAN N-RAS GENE, CODON 12 SEQUENCE, DEOXYRIBONUCLEIC ACID, DNA; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.83 Å |
| rg_electron | 12.37 Å |
| i0 | 2376180.00 |
| molecular_weight | 6694.0 kDa |
| excluded_volume | 6463 ų |
| envelope_volume | 8604 ų |
| shell_volume | 6698 ų |
| envelope_diameter | 44.3 Å |
| shell_rg | 16.29 Å |
| envelope_rg | 12.61 Å |
| shape_rg | 12.25 Å |
| total_rg | 13.17 Å |
| total_atoms | 694 |
| n_residues | 22 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 44.0 Å |
| rg_real | 12.89 Å |
| rg_real_error | 0.31 Å |
| i0_real | 2.3760e+06 |
| i0_real_error | 2.4390e+04 |
| rg_reciprocal | 12.88 Å |
| i0_reciprocal | 2376000.0000 |
| total_estimate | 0.8464 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.5 Å |
| skewness | 0.437 |
| kurtosis | -0.239 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 163600.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.702; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.916; Smooth: 0.977 |