1ag3
DUPLEX OLIGODEOXYNUCLEOTIDE CONTAINING PROPANODEOXYGUANOSINE OPPOSITE A TWO-BASE DELETION, NMR, MINIMIZED AVERAGE STRUCTURE
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1ag3 |
| deposition_date | 1997-03-31 |
| title | DUPLEX OLIGODEOXYNUCLEOTIDE CONTAINING PROPANODEOXYGUANOSINE OPPOSITE A TWO-BASE DELETION, NMR, MINIMIZED AVERAGE STRUCTURE |
| keywords | ;DNA ADDUCTS, DNA CONFORMATION, NMR SPECTROSCOPY, STRUCTURAL REFINEMENT, PROPANODEOXYGUANOSINE, SALMONELLA TYPHIMURIUM HISD3052, DEOXYRIBONUCLEIC ACID, DNA ;; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.95 Å |
| rg_electron | 13.59 Å |
| i0 | 2800090.00 |
| molecular_weight | 7353.0 kDa |
| excluded_volume | 7139 ų |
| envelope_volume | 9968 ų |
| shell_volume | 7108 ų |
| envelope_diameter | 47.9 Å |
| shell_rg | 17.19 Å |
| envelope_rg | 13.69 Å |
| shape_rg | 13.48 Å |
| total_rg | 14.30 Å |
| total_atoms | 765 |
| n_residues | 23 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 48.5 Å |
| rg_real | 14.01 Å |
| rg_real_error | 0.50 Å |
| i0_real | 2.8000e+06 |
| i0_real_error | 3.3020e+04 |
| rg_reciprocal | 14.01 Å |
| i0_reciprocal | 2800000.0000 |
| total_estimate | 0.8261 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 47.9 Å |
| skewness | 0.405 |
| kurtosis | -0.347 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 164400.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.643; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.851; Smooth: 0.958 |