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;THE SOLUTION STRUCTURE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE DUPLEX CODING FOR AMINO ACIDS 60-62 OF THE PRODUCT OF THE N-RAS PROTOONCOGENE, NMR, MINIMIZED AVERAGE STRUCTURE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1agh |
| deposition_date | 1997-03-25 |
| title | ;THE SOLUTION STRUCTURE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE DUPLEX CODING FOR AMINO ACIDS 60-62 OF THE PRODUCT OF THE N-RAS PROTOONCOGENE, NMR, MINIMIZED AVERAGE STRUCTURE ; |
| keywords | DNA DUPLEX, B-DNA, HUMAN N-RAS GENE, CODON 61 SEQUENCE, DEOXYRIBONUCLEIC ACID, DNA; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.84 Å |
| rg_electron | 12.30 Å |
| i0 | 2341980.00 |
| molecular_weight | 6692.0 kDa |
| excluded_volume | 6502 ų |
| envelope_volume | 8639 ų |
| shell_volume | 6737 ų |
| envelope_diameter | 43.0 Å |
| shell_rg | 16.44 Å |
| envelope_rg | 12.49 Å |
| shape_rg | 12.17 Å |
| total_rg | 13.15 Å |
| total_atoms | 696 |
| n_residues | 22 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 44.0 Å |
| rg_real | 12.89 Å |
| rg_real_error | 0.35 Å |
| i0_real | 2.3420e+06 |
| i0_real_error | 3.0060e+04 |
| rg_reciprocal | 12.88 Å |
| i0_reciprocal | 2342000.0000 |
| total_estimate | 0.8549 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 42.9 Å |
| skewness | 0.409 |
| kurtosis | -0.296 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 166600.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.740; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.910; Smooth: 0.980 |