1agk
;THE SOLUTION NMR STRUCTURE OF AN (R)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE SECOND POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1agk |
| deposition_date | 1997-03-25 |
| title | ;THE SOLUTION NMR STRUCTURE OF AN (R)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE SECOND POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE ; |
| keywords | ;DNA DUPLEX, B-DNA, HUMAN N-RAS GENE, CODON 61 SEQUENCE, R-STYRENE OXIDE ADDUCT, N6-ADENINE, MAJOR GROOVE, DEOXYRIBONUCLEIC ACID, DNA ;; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.78 Å |
| rg_electron | 12.16 Å |
| i0 | 2362210.00 |
| molecular_weight | 6812.0 kDa |
| excluded_volume | 6684 ų |
| envelope_volume | 8543 ų |
| shell_volume | 6728 ų |
| envelope_diameter | 42.3 Å |
| shell_rg | 16.24 Å |
| envelope_rg | 12.36 Å |
| shape_rg | 12.03 Å |
| total_rg | 13.03 Å |
| total_atoms | 713 |
| n_residues | 21 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 43.6 Å |
| rg_real | 12.81 Å |
| rg_real_error | 0.29 Å |
| i0_real | 2.3620e+06 |
| i0_real_error | 2.8250e+04 |
| rg_reciprocal | 12.81 Å |
| i0_reciprocal | 2362000.0000 |
| total_estimate | 0.8686 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.3 Å |
| skewness | 0.378 |
| kurtosis | -0.345 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 138200.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.814; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.904; Smooth: 0.942 |