1ago
;THE SOLUTION NMR STRUCTURE OF AN (S)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE THIRD POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1ago |
| deposition_date | 1997-03-25 |
| title | ;THE SOLUTION NMR STRUCTURE OF AN (S)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE THIRD POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE ; |
| keywords | ;DNA DUPLEX, B-DNA, HUMAN N-RAS GENE, CODON 61 SEQUENCE, S-STYRENE OXIDE ADDUCT, N6-ADENINE ADDUCT, MAJOR GROOVE ADDUCT, DEOXYRIBONUCLEIC ACID, DNA ;; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.80 Å |
| rg_electron | 12.19 Å |
| i0 | 2363970.00 |
| molecular_weight | 6812.0 kDa |
| excluded_volume | 6684 ų |
| envelope_volume | 8711 ų |
| shell_volume | 6821 ų |
| envelope_diameter | 43.0 Å |
| shell_rg | 16.36 Å |
| envelope_rg | 12.41 Å |
| shape_rg | 12.06 Å |
| total_rg | 13.07 Å |
| total_atoms | 713 |
| n_residues | 21 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 43.5 Å |
| rg_real | 12.84 Å |
| rg_real_error | 0.27 Å |
| i0_real | 2.3640e+06 |
| i0_real_error | 2.4930e+04 |
| rg_reciprocal | 12.84 Å |
| i0_reciprocal | 2364000.0000 |
| total_estimate | 0.8648 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 43.0 Å |
| skewness | 0.402 |
| kurtosis | -0.317 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 169800.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.793; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.910; Smooth: 0.948 |