1al9
;NMR STUDY OF DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3') SELF-COMPLEMENTARY DUPLEX COMPLEXED WITH A BIS-DAUNORUBICIN, MINIMIZED AVERAGE STRUCTURE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1al9 |
| deposition_date | 1997-06-12 |
| title | ;NMR STUDY OF DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3') SELF-COMPLEMENTARY DUPLEX COMPLEXED WITH A BIS-DAUNORUBICIN, MINIMIZED AVERAGE STRUCTURE ; |
| keywords | COMPLEX (DEOXYRIBONUCLEIC ACID-DRUG), BIS-INTERCALATOR, DAUNORUBICIN, DNA, DEOXYRIBONUCLEIC ACID; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 11.78 Å |
| rg_electron | 10.89 Å |
| i0 | 1524180.00 |
| molecular_weight | 5991.0 kDa |
| excluded_volume | 6269 ų |
| envelope_volume | 7082 ų |
| shell_volume | 6153 ų |
| envelope_diameter | 37.1 Å |
| shell_rg | 15.39 Å |
| envelope_rg | 11.27 Å |
| shape_rg | 10.77 Å |
| total_rg | 11.96 Å |
| total_atoms | 654 |
| n_residues | 16 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 39.2 Å |
| rg_real | 11.80 Å |
| rg_real_error | 0.31 Å |
| i0_real | 1.5240e+06 |
| i0_real_error | 1.5590e+04 |
| rg_reciprocal | 11.80 Å |
| i0_reciprocal | 1524000.0000 |
| total_estimate | 0.8910 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 12.9 Å |
| skewness | 0.359 |
| kurtosis | -0.322 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 91540.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.894; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.927; Smooth: 0.970 |