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1aoz

REFINED CRYSTAL STRUCTURE OF ASCORBATE OXIDASE AT 1.9 ANGSTROMS RESOLUTION

Method: X-RAY DIFFRACTION D_max: 120.2 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1aoz
deposition_date	1992-01-08
title	REFINED CRYSTAL STRUCTURE OF ASCORBATE OXIDASE AT 1.9 ANGSTROMS RESOLUTION
keywords	OXIDOREDUCTASE(OXYGEN ACCEPTOR); OXIDOREDUCTASE(OXYGEN ACCEPTOR)
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	34.87 Å
rg_electron	34.68 Å
i0	235566000.00
molecular_weight	124410.0 kDa
excluded_volume	155520 Å³
envelope_volume	195090 Å³
shell_volume	46747 Å³
envelope_diameter	127.2 Å
shell_rg	41.27 Å
envelope_rg	34.74 Å
shape_rg	34.68 Å
total_rg	35.15 Å
total_atoms	8771
n_residues	1104
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	120.2 Å
rg_real	34.94 Å
rg_real_error	1.03 Å
i0_real	2.3560e+08
i0_real_error	3.5460e+06
rg_reciprocal	34.90 Å
i0_reciprocal	235600000.0000
total_estimate	0.8673
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	34.7 Å
skewness	0.406
kurtosis	-0.413
angular_range	— – 0.2250 Å⁻¹
current_alpha	0.0000
highest_alpha	109700000.0000
n_real_points	46
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.783; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.953; Smooth: 0.969

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4. Crystallography & Experiment

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5. Entities & Polymer Info (5)

Entity 1 polymer

description	ASCORBATE OXIDASE
formula_weight	61768.6 kDa
ec_number	1.10.3.3
src_method	man
entity_count	2

Polymer

type	polypeptide(L)
strand_id	A,B
atom_count	9743

SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPKNP

Source

organism	Cucurbita pepo var. melopepo
common_name	zucchini
ncbi_taxonomy_id	3665

Entity 2 non-polymer

description	2-acetamido-2-deoxy-beta-D-glucopyranose
formula_weight	221.2 kDa
src_method	man
entity_count	2

Entity 3 non-polymer

description	COPPER (II) ION
formula_weight	63.5 kDa
src_method	syn
entity_count	5

Entity 4 non-polymer

description	CU-O-CU LINKAGE
formula_weight	143.1 kDa
src_method	syn
entity_count	2

Entity 5 water

description	water
formula_weight	18.0 kDa
src_method	syn
entity_count	972

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6. Citations (2)

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length_a	106.700 Å
length_b	105.100 Å
length_c	113.500 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 21 21 2
int_tables_number	18
crystal_system	—

resolution	1.900 Å
resolution_low	— Å
r_factor	—
r_work	—
r_free	—

fit	/app/data/saxs_computation/ao/1aoz/1aoz.fit
pddf	/app/data/pr_computation/ao/1aoz/1aoz.pr.out
profile	/app/data/saxs_computation/ao/1aoz/1aoz.dat