1b6y
;3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE ADENINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS, 2 STRUCTURES ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1b6y |
| deposition_date | 1999-01-19 |
| title | ;3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE ADENINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS, 2 STRUCTURES ; |
| keywords | DEOXYRIBONUCLEIC ACID, ETHENODC, EDC, EXOCYCLIC LESION, DNA; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.30 Å |
| rg_electron | 13.06 Å |
| i0 | 8047980.00 |
| molecular_weight | 13401.0 kDa |
| excluded_volume | 13013 ų |
| envelope_volume | 9297 ų |
| shell_volume | 6794 ų |
| envelope_diameter | 43.9 Å |
| shell_rg | 17.06 Å |
| envelope_rg | 13.06 Å |
| shape_rg | 12.92 Å |
| total_rg | 13.60 Å |
| total_atoms | 1392 |
| n_residues | 42 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 42.5 Å |
| rg_real | 13.35 Å |
| rg_real_error | 0.34 Å |
| i0_real | 8.0480e+06 |
| i0_real_error | 9.5580e+04 |
| rg_reciprocal | 13.35 Å |
| i0_reciprocal | 8048000.0000 |
| total_estimate | 0.8036 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 11.8 Å |
| skewness | 0.299 |
| kurtosis | -0.642 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 101600.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.861; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.859; Smooth: 0.000 |