1bdn
CRYSTAL LATTICE PACKING IS IMPORTANT IN DETERMINING THE BEND OF A DNA DODECAMER CONTAINING AN ADENINE TRACT
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1bdn |
| deposition_date | 1989-07-25 |
| title | CRYSTAL LATTICE PACKING IS IMPORTANT IN DETERMINING THE BEND OF A DNA DODECAMER CONTAINING AN ADENINE TRACT |
| keywords | B-DNA, DOUBLE HELIX, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.39 Å |
| rg_electron | 13.16 Å |
| i0 | 9610410.00 |
| molecular_weight | 14671.0 kDa |
| excluded_volume | 14261 ų |
| envelope_volume | 10745 ų |
| shell_volume | 7699 ų |
| envelope_diameter | 47.2 Å |
| shell_rg | 17.29 Å |
| envelope_rg | 13.53 Å |
| shape_rg | 13.07 Å |
| total_rg | 13.66 Å |
| total_atoms | 974 |
| n_residues | 48 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 46.1 Å |
| rg_real | 13.48 Å |
| rg_real_error | 0.48 Å |
| i0_real | 9.6100e+06 |
| i0_real_error | 1.2170e+05 |
| rg_reciprocal | 13.47 Å |
| i0_reciprocal | 9610000.0000 |
| total_estimate | 0.7087 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 13.4 Å |
| skewness | 0.461 |
| kurtosis | -0.316 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 155000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.792; Stabil: 0.999; Sysdev: 0.368; Positv: 1.000; Valcen: 0.778; Smooth: 0.954 |