1c2q
SOLUTION STRUCTURE OF A DNA.RNA HYBRID CONTAINING AN ALPHAT-ANOMERIC THYMIDINE AND POLARITY REVERSALS
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1c2q |
| deposition_date | 1999-07-26 |
| title | SOLUTION STRUCTURE OF A DNA.RNA HYBRID CONTAINING AN ALPHAT-ANOMERIC THYMIDINE AND POLARITY REVERSALS |
| keywords | ;DNA/RNA HYBRID, ALPHAT-ANOMERIC THYMIDINE, 3'-3'/5'-5' PHOSPHODIESTER LINKAGES, DNA-RNA HYBRID ;; DNA-RNA HYBRID |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 11.81 Å |
| rg_electron | 11.08 Å |
| i0 | 1724600.00 |
| molecular_weight | 5582.0 kDa |
| excluded_volume | 5364 ų |
| envelope_volume | 7143 ų |
| shell_volume | 6078 ų |
| envelope_diameter | 38.5 Å |
| shell_rg | 15.44 Å |
| envelope_rg | 11.22 Å |
| shape_rg | 10.92 Å |
| total_rg | 12.08 Å |
| total_atoms | 575 |
| n_residues | 17 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 39.3 Å |
| rg_real | 11.78 Å |
| rg_real_error | 0.32 Å |
| i0_real | 1.7250e+06 |
| i0_real_error | 1.9130e+04 |
| rg_reciprocal | 11.79 Å |
| i0_reciprocal | 1725000.0000 |
| total_estimate | 0.8037 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 15.9 Å |
| skewness | 0.231 |
| kurtosis | -0.277 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 50730.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.829; Stabil: 0.994; Sysdev: 1.000; Positv: 1.000; Valcen: 0.976; Smooth: 0.000 |