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1cc0

CRYSTAL STRUCTURE OF THE RHOA.GDP-RHOGDI COMPLEX

Method: X-RAY DIFFRACTION D_max: 97.3 Å Quality: EXCELLENT

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1cc0
deposition_date	1999-03-03
title	CRYSTAL STRUCTURE OF THE RHOA.GDP-RHOGDI COMPLEX
keywords	RHO GTPASE, G-PROTEIN, SIGNALING PROTEIN; SIGNALING PROTEIN
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	31.23 Å
rg_electron	30.45 Å
i0	114912000.00
molecular_weight	84214.0 kDa
excluded_volume	104790 Å³
envelope_volume	127180 Å³
shell_volume	35373 Å³
envelope_diameter	98.5 Å
shell_rg	37.26 Å
envelope_rg	29.52 Å
shape_rg	29.67 Å
total_rg	33.10 Å
total_atoms	5066
n_residues	626
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	97.3 Å
rg_real	31.12 Å
rg_real_error	0.52 Å
i0_real	1.1490e+08
i0_real_error	1.5430e+06
rg_reciprocal	31.17 Å
i0_reciprocal	114900000.0000
total_estimate	0.9105
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	36.2 Å
skewness	0.158
kurtosis	-0.650
angular_range	— – 0.2550 Å⁻¹
current_alpha	0.0000
highest_alpha	19420000.0000
n_real_points	52
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.961; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.996; Smooth: 0.952

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4. Crystallography & Experiment

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5. Entities & Polymer Info (4)

Entity 1 polymer

description	transforming protein rhoA
formula_weight	21440.6 kDa
src_method	man
entity_count	2

Polymer

type	polypeptide(L)
strand_id	A,C
atom_count	5174

MAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKKKSGC

Source

organism	Homo sapiens
common_name	human
ncbi_taxonomy_id	9606
host_organism	Saccharomyces cerevisiae

Entity 2 polymer

description	rho GDP dissociation inhibitor alpha
formula_weight	23238.1 kDa
src_method	man
entity_count	2

Polymer

type	polypeptide(L)
strand_id	E,F

MAEQEPTAEQLAQIAAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADPNVPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDWKD

Source

organism	Homo sapiens
common_name	human
ncbi_taxonomy_id	9606
host_organism	Saccharomyces cerevisiae

Entity 3 non-polymer

description	MAGNESIUM ION
formula_weight	24.3 kDa
src_method	syn
entity_count	2

Entity 4 non-polymer

description	GUANOSINE-5'-DIPHOSPHATE
formula_weight	443.2 kDa
src_method	syn
entity_count	2

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6. Citations (5)

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length_a	139.300 Å
length_b	139.300 Å
length_c	253.100 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	24

space_group	P 65 2 2
int_tables_number	179
crystal_system	—

resolution	5.000 Å
resolution_low	— Å
r_factor	—
r_work	—
r_free	—

fit	/app/data/saxs_computation/cc/1cc0/1cc0.fit
pddf	/app/data/pr_computation/cc/1cc0/1cc0.pr.out
profile	/app/data/saxs_computation/cc/1cc0/1cc0.dat

CRYSTAL STRUCTURE OF THE RHOA.GDP-RHOGDI COMPLEX

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (4)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Source

Entity 3 non-polymer

Entity 4 non-polymer

6. Citations (5)

7. Files & Curves (10)

Files (7)

Curves (3)