HYDROGENASE (SMALL SUBUNIT)
物种未注明
当前结构中的状态
| Assembly | 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与共同组分 | 实验方法与环境 | 结构质量 |
|---|---|---|---|---|---|---|
| 1 | 蛋白异源复合物 异源复合物 蛋白 × 2 PDB 声明:dimeric(2) 与蛋白拷贝数一致 | 链 S; UniProt 33–315 | 未记录 | HYDROGENASE (LARGE SUBUNIT) × 1 (P13065) SF4 IRON/SULFUR CLUSTER × 3 NI NICKEL (II) ION × 1 FE2 FE (II) ION × 1 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 H2S HYDROSULFURIC ACID × 1 | X-RAY DIFFRACTION X-ray结晶条件:pH 6.2;pH 6.2 | 分辨率 2.15 Å R-free 0.248 |
数据库中的同蛋白其他状态
以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly, “相对当前条目”直接指出证据层面的不同;没有差异标签表示当前已读取字段一致。
| 其他 PDB | 相对当前条目 1CC1 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法与环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 4KL8 High-resolution structure of anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-07 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 S
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 3 CL CHLORIDE ION × 1 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;22-27% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, under air, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.52 Å R-free 0.171 |
| 4KL8 High-resolution structure of anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-07 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 T
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 5 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;22-27% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, under air, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.52 Å R-free 0.171 |
| 4KN9 High-resolution structure of H2-activated anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-09 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 S
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 3 CL CHLORIDE ION × 1 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.40 Å R-free 0.168 |
| 4KN9 High-resolution structure of H2-activated anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-09 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 T
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 4 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.40 Å R-free 0.168 |
| 4KO1 High X-ray dose structure of H2-activated anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-11 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 S
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 3 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.55 Å R-free 0.184 |
| 4KO1 High X-ray dose structure of H2-activated anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-11 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 T
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 4 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.55 Å R-free 0.184 |
| 4KO2 Low X-ray dose structure of H2-activated anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-11 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 S
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 4 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.60 Å R-free 0.194 |
| 4KO2 Low X-ray dose structure of H2-activated anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-11 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 T
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 4 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.60 Å R-free 0.194 |
| 4KO3 Low X-ray dose structure of anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-11 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 S
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 3 CL CHLORIDE ION × 1 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.70 Å R-free 0.201 |
| 4KO3 Low X-ray dose structure of anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-11 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 T
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 5 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 1.70 Å R-free 0.201 |
| 4KO4 High X-ray dose structure of anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-11 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 S
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 3 CL CHLORIDE ION × 1 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.00 Å R-free 0.172 |
| 4KO4 High X-ray dose structure of anaerobically purified Dm. baculatum [NiFeSe]-hydrogenase after crystallization under air 提交 2013-05-11 | 配体/离子不同 实验环境不同 结构质量不同 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric |
链 T
33–315(283 aa)
|
未记录 | SF4 IRON/SULFUR CLUSTER × 3 CA CALCIUM ION × 5 GOL GLYCEROL × 2 FCO CARBONMONOXIDE-(DICYANO) IRON × 1 NI NICKEL (II) ION × 1 H2S HYDROSULFURIC ACID × 1 |
X-RAY DIFFRACTION
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;277 K;25% PEG 4000, 0.2M CaCl2, 0.1M Tris/HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.00 Å R-free 0.172 |
共 6 个其他 PDB 条目、12 个 assembly。 打开独立比较页并筛选聚集状态
查看构建体与数据证据
| UniProt名称 | PHSS_DESBA |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 S; PDB构建体 1–283; UniProt 33–315 |