1coc
SOLUTION-STATE STRUCTURE OF A DNA DODECAMER DUPLEX CONTAINING A CIS-SYN THYMINE CYCLOBUTANE DIMER.
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1coc |
| deposition_date | 1999-05-26 |
| title | SOLUTION-STATE STRUCTURE OF A DNA DODECAMER DUPLEX CONTAINING A CIS-SYN THYMINE CYCLOBUTANE DIMER. |
| keywords | DNA STRUCTURE, UV-PHOTOPRODUCTS, BII BACKBONE, DNA; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 15.35 Å |
| rg_electron | 15.02 Å |
| i0 | 2668100.00 |
| molecular_weight | 7310.0 kDa |
| excluded_volume | 7128 ų |
| envelope_volume | 10604 ų |
| shell_volume | 6873 ų |
| envelope_diameter | 51.2 Å |
| shell_rg | 18.46 Å |
| envelope_rg | 14.94 Å |
| shape_rg | 14.91 Å |
| total_rg | 15.67 Å |
| total_atoms | 761 |
| n_residues | 24 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 51.4 Å |
| rg_real | 15.48 Å |
| rg_real_error | 0.42 Å |
| i0_real | 2.6680e+06 |
| i0_real_error | 3.4190e+04 |
| rg_reciprocal | 15.47 Å |
| i0_reciprocal | 2668000.0000 |
| total_estimate | 0.8253 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 12.4 Å |
| skewness | 0.375 |
| kurtosis | -0.570 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 313100.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.728; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.563; Smooth: 0.980 |