1d13
MOLECULAR STRUCTURE OF AN A-DNA DECAMER D(ACCGGCCGGT)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d13 |
| deposition_date | 1989-10-20 |
| title | MOLECULAR STRUCTURE OF AN A-DNA DECAMER D(ACCGGCCGGT) |
| keywords | A-DNA, DOUBLE HELIX, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 11.40 Å |
| rg_electron | 10.88 Å |
| i0 | 539244.00 |
| molecular_weight | 3037.0 kDa |
| excluded_volume | 2928 ų |
| envelope_volume | 4184 ų |
| shell_volume | 3844 ų |
| envelope_diameter | 34.0 Å |
| shell_rg | 14.69 Å |
| envelope_rg | 10.64 Å |
| shape_rg | 10.79 Å |
| total_rg | 11.78 Å |
| total_atoms | 202 |
| n_residues | 10 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 36.7 Å |
| rg_real | 11.43 Å |
| rg_real_error | 0.33 Å |
| i0_real | 5.3920e+05 |
| i0_real_error | 5.8390e+03 |
| rg_reciprocal | 11.43 Å |
| i0_reciprocal | 539200.0000 |
| total_estimate | 0.6705 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 3 |
| r_peak_primary | 16.3 Å |
| skewness | 0.172 |
| kurtosis | -0.767 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 11710.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.940; Stabil: 1.000; Sysdev: 0.062; Positv: 1.000; Valcen: 0.736; Smooth: 0.972 |