1d16
STRUCTURE OF A T4 HAIRPIN LOOP ON A Z-DNA STEM AND COMPARISON WITH A-RNA AND B-DNA LOOPS
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d16 |
| deposition_date | 1988-04-12 |
| title | STRUCTURE OF A T4 HAIRPIN LOOP ON A Z-DNA STEM AND COMPARISON WITH A-RNA AND B-DNA LOOPS |
| keywords | Z-DNA STEM, SINGLE STRAND, HAIRPIN LOOP, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 11.10 Å |
| rg_electron | 10.53 Å |
| i0 | 1308880.00 |
| molecular_weight | 4879.0 kDa |
| excluded_volume | 4743 ų |
| envelope_volume | 6055 ų |
| shell_volume | 5550 ų |
| envelope_diameter | 36.7 Å |
| shell_rg | 14.81 Å |
| envelope_rg | 10.88 Å |
| shape_rg | 10.51 Å |
| total_rg | 11.39 Å |
| total_atoms | 323 |
| n_residues | 16 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 38.6 Å |
| rg_real | 11.13 Å |
| rg_real_error | 0.42 Å |
| i0_real | 1.3090e+06 |
| i0_real_error | 1.6180e+04 |
| rg_reciprocal | 11.13 Å |
| i0_reciprocal | 1309000.0000 |
| total_estimate | 0.8663 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 12.7 Å |
| skewness | 0.405 |
| kurtosis | -0.212 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 84230.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.805; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.887; Smooth: 0.954 |