1d41
STABILIZATION OF Z-DNA BY DEMETHYLATION OF THYMINE BASES: 1.3 ANGSTROMS SINGLE-CRYSTAL STRUCTURE OF D(M5CGUAM5CG)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d41 |
| deposition_date | 1991-05-07 |
| title | STABILIZATION OF Z-DNA BY DEMETHYLATION OF THYMINE BASES: 1.3 ANGSTROMS SINGLE-CRYSTAL STRUCTURE OF D(M5CGUAM5CG) |
| keywords | Z-DNA, DOUBLE HELIX, MODIFIED, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 9.45 Å |
| rg_electron | 8.66 Å |
| i0 | 759512.00 |
| molecular_weight | 3669.0 kDa |
| excluded_volume | 3603 ų |
| envelope_volume | 4304 ų |
| shell_volume | 4798 ų |
| envelope_diameter | 27.4 Å |
| shell_rg | 12.89 Å |
| envelope_rg | 8.77 Å |
| shape_rg | 8.62 Å |
| total_rg | 9.67 Å |
| total_atoms | 244 |
| n_residues | 8 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 30.7 Å |
| rg_real | 9.40 Å |
| rg_real_error | 0.24 Å |
| i0_real | 7.5950e+05 |
| i0_real_error | 7.1340e+03 |
| rg_reciprocal | 9.40 Å |
| i0_reciprocal | 759500.0000 |
| total_estimate | 0.7472 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 12.1 Å |
| skewness | 0.176 |
| kurtosis | -0.313 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 44940.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.879; Stabil: 1.000; Sysdev: 0.368; Positv: 1.000; Valcen: 0.999; Smooth: 0.969 |