1d5q
SOLUTION STRUCTURE OF A MINI-PROTEIN REPRODUCING THE CORE OF THE CD4 SURFACE INTERACTING WITH THE HIV-1 ENVELOPE GLYCOPROTEIN
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d5q |
| deposition_date | 1999-10-11 |
| title | SOLUTION STRUCTURE OF A MINI-PROTEIN REPRODUCING THE CORE OF THE CD4 SURFACE INTERACTING WITH THE HIV-1 ENVELOPE GLYCOPROTEIN |
| keywords | ALPHA-BETA STRUCTURE, CHARYBDOTOXIN-LIKE MOTIF, BINDING PROTEIN; BINDING PROTEIN |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 8.95 Å |
| rg_electron | 7.91 Å |
| i0 | 270184.00 |
| molecular_weight | 2741.0 kDa |
| excluded_volume | 3285 ų |
| envelope_volume | 3606 ų |
| shell_volume | 4299 ų |
| envelope_diameter | 26.5 Å |
| shell_rg | 12.39 Å |
| envelope_rg | 8.41 Å |
| shape_rg | 7.97 Å |
| total_rg | 9.36 Å |
| total_atoms | 367 |
| n_residues | 27 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 36.7 Å |
| rg_real | 8.97 Å |
| rg_real_error | 0.48 Å |
| i0_real | 2.7020e+05 |
| i0_real_error | 2.8080e+03 |
| rg_reciprocal | 8.97 Å |
| i0_reciprocal | 270200.0000 |
| total_estimate | 0.7642 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 10.2 Å |
| skewness | 0.394 |
| kurtosis | -0.219 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 19320.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.498; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.436; Smooth: 1.000 |