1d65
;MOLECULAR STRUCTURE OF THE B-DNA DODECAMER D(CGCAAATTTGCG)2; AN EXAMINATION OF PROPELLER TWIST AND MINOR-GROOVE WATER STRUCTURE AT 2.2 ANGSTROMS RESOLUTION ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d65 |
| deposition_date | 1992-03-02 |
| title | ;MOLECULAR STRUCTURE OF THE B-DNA DODECAMER D(CGCAAATTTGCG)2; AN EXAMINATION OF PROPELLER TWIST AND MINOR-GROOVE WATER STRUCTURE AT 2.2 ANGSTROMS RESOLUTION ; |
| keywords | B-DNA, DOUBLE HELIX, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.84 Å |
| rg_electron | 13.37 Å |
| i0 | 2738230.00 |
| molecular_weight | 7311.0 kDa |
| excluded_volume | 7109 ų |
| envelope_volume | 9893 ų |
| shell_volume | 7168 ų |
| envelope_diameter | 46.3 Å |
| shell_rg | 17.17 Å |
| envelope_rg | 13.50 Å |
| shape_rg | 13.27 Å |
| total_rg | 14.09 Å |
| total_atoms | 486 |
| n_residues | 24 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 47.0 Å |
| rg_real | 13.93 Å |
| rg_real_error | 0.31 Å |
| i0_real | 2.7380e+06 |
| i0_real_error | 2.9500e+04 |
| rg_reciprocal | 13.92 Å |
| i0_reciprocal | 2738000.0000 |
| total_estimate | 0.8583 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.3 Å |
| skewness | 0.456 |
| kurtosis | -0.313 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 207000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.791; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.835; Smooth: 0.947 |