1d6d
SOLUTION DNA STRUCTURE CONTAINING (A-A)-T TRIADS INTERDIGITATED BETWEEN A-T BASE PAIRS AND GGGG TETRADS; NMR, 8 STRUCT.
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d6d |
| deposition_date | 1999-10-13 |
| title | SOLUTION DNA STRUCTURE CONTAINING (A-A)-T TRIADS INTERDIGITATED BETWEEN A-T BASE PAIRS AND GGGG TETRADS; NMR, 8 STRUCT. |
| keywords | MULTI-STRANDED DNA ARCHITECTURE, G-TETRAD, T-(A-A) TRIAD, A(SYN)-A(ANTI) PLATFORM, ZIPPER MOTIF, BASE-SUGAR STACKING, DNA; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 10.53 Å |
| rg_electron | 10.45 Å |
| i0 | 143175000.00 |
| molecular_weight | 59753.0 kDa |
| excluded_volume | 57863 ų |
| envelope_volume | 10648 ų |
| shell_volume | 8372 ų |
| envelope_diameter | 36.9 Å |
| shell_rg | 16.46 Å |
| envelope_rg | 11.47 Å |
| shape_rg | 10.28 Å |
| total_rg | 10.89 Å |
| total_atoms | 6176 |
| n_residues | 192 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 35.0 Å |
| rg_real | 10.47 Å |
| rg_real_error | 0.28 Å |
| i0_real | 1.4320e+08 |
| i0_real_error | 1.4480e+06 |
| rg_reciprocal | 10.47 Å |
| i0_reciprocal | 143200000.0000 |
| total_estimate | 0.8720 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 12.4 Å |
| skewness | 0.238 |
| kurtosis | -0.280 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 517900.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.790; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.964 |