1d85
;STRUCTURAL CONSEQUENCES OF A CARCINOGENIC ALKYLATION LESION ON DNA: EFFECT OF O6-ETHYL-GUANINE ON THE MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-NETROPSIN COMPLEX ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d85 |
| deposition_date | 1992-08-24 |
| title | ;STRUCTURAL CONSEQUENCES OF A CARCINOGENIC ALKYLATION LESION ON DNA: EFFECT OF O6-ETHYL-GUANINE ON THE MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-NETROPSIN COMPLEX ; |
| keywords | B-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.69 Å |
| rg_electron | 13.17 Å |
| i0 | 2971180.00 |
| molecular_weight | 7800.0 kDa |
| excluded_volume | 7660 ų |
| envelope_volume | 9956 ų |
| shell_volume | 7281 ų |
| envelope_diameter | 46.4 Å |
| shell_rg | 17.09 Å |
| envelope_rg | 13.55 Å |
| shape_rg | 13.06 Å |
| total_rg | 13.91 Å |
| total_atoms | 521 |
| n_residues | 22 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 47.2 Å |
| rg_real | 13.80 Å |
| rg_real_error | 0.31 Å |
| i0_real | 2.9710e+06 |
| i0_real_error | 3.3590e+04 |
| rg_reciprocal | 13.79 Å |
| i0_reciprocal | 2971000.0000 |
| total_estimate | 0.8517 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.3 Å |
| skewness | 0.515 |
| kurtosis | -0.211 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 207500.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.771; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.777; Smooth: 0.979 |