1d87
;CONFORMATIONAL INFLUENCE OF THE RIBOSE 2'-HYDROXYL GROUP: CRYSTAL STRUCTURES OF DNA-RNA CHIMERIC DUPLEXES ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d87 |
| deposition_date | 1992-08-28 |
| title | ;CONFORMATIONAL INFLUENCE OF THE RIBOSE 2'-HYDROXYL GROUP: CRYSTAL STRUCTURES OF DNA-RNA CHIMERIC DUPLEXES ; |
| keywords | A-DNA/RNA, DOUBLE HELIX, DNA-RNA HYBRID COMPLEX, DNA-RNA HYBRID; DNA-RNA HYBRID |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.23 Å |
| rg_electron | 11.45 Å |
| i0 | 1988110.00 |
| molecular_weight | 6104.0 kDa |
| excluded_volume | 5914 ų |
| envelope_volume | 7806 ų |
| shell_volume | 6406 ų |
| envelope_diameter | 40.5 Å |
| shell_rg | 16.00 Å |
| envelope_rg | 11.37 Å |
| shape_rg | 11.31 Å |
| total_rg | 12.43 Å |
| total_atoms | 406 |
| n_residues | 20 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 43.5 Å |
| rg_real | 12.19 Å |
| rg_real_error | 0.40 Å |
| i0_real | 1.9880e+06 |
| i0_real_error | 2.2890e+04 |
| rg_reciprocal | 12.19 Å |
| i0_reciprocal | 1988000.0000 |
| total_estimate | 0.8311 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 16.5 Å |
| skewness | 0.225 |
| kurtosis | -0.153 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 69280.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.613; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.971; Smooth: 0.991 |