1d8g
ULTRAHIGH RESOLUTION CRYSTAL STRUCTURE OF B-DNA DECAMER D(CCAGTACTGG)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1d8g |
| deposition_date | 1999-10-23 |
| title | ULTRAHIGH RESOLUTION CRYSTAL STRUCTURE OF B-DNA DECAMER D(CCAGTACTGG) |
| keywords | B-DNA, ALTERNATE CONFORMATION, ULTRAHIGH RESOLUTION, TRP REPRESSOR, POLYAMIDE, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.28 Å |
| rg_electron | 11.89 Å |
| i0 | 564803.00 |
| molecular_weight | 3196.0 kDa |
| excluded_volume | 3154 ų |
| envelope_volume | 4690 ų |
| shell_volume | 4093 ų |
| envelope_diameter | 40.7 Å |
| shell_rg | 15.08 Å |
| envelope_rg | 12.08 Å |
| shape_rg | 11.67 Å |
| total_rg | 12.87 Å |
| total_atoms | 206 |
| n_residues | 10 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 42.7 Å |
| rg_real | 12.41 Å |
| rg_real_error | 0.43 Å |
| i0_real | 5.6480e+05 |
| i0_real_error | 6.0810e+03 |
| rg_reciprocal | 12.40 Å |
| i0_reciprocal | 564800.0000 |
| total_estimate | 0.7413 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 9.7 Å |
| skewness | 0.342 |
| kurtosis | -0.729 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 18270.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.765; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.338; Smooth: 0.000 |