1dau
;Analog of dickerson-drew DNA dodecamer with 6'-alpha-methyl carbocyclic thymidines, NMR, minimized average structure ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dau |
| deposition_date | 1998-01-21 |
| title | ;Analog of dickerson-drew DNA dodecamer with 6'-alpha-methyl carbocyclic thymidines, NMR, minimized average structure ; |
| keywords | DNA, CARBOCYCLIC, DODECAMER, DEOXYRIBONUCLEIC ACID, MINIMIZED AVERAGE STRUCTURE; DNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 14.57 Å |
| rg_electron | 13.88 Å |
| i0 | 2687200.00 |
| molecular_weight | 7365.0 kDa |
| excluded_volume | 7268 ų |
| envelope_volume | 10568 ų |
| shell_volume | 7281 ų |
| envelope_diameter | 47.9 Å |
| shell_rg | 17.73 Å |
| envelope_rg | 13.84 Å |
| shape_rg | 13.74 Å |
| total_rg | 14.69 Å |
| total_atoms | 778 |
| n_residues | 20 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 49.5 Å |
| rg_real | 14.62 Å |
| rg_real_error | 0.40 Å |
| i0_real | 2.6870e+06 |
| i0_real_error | 3.3060e+04 |
| rg_reciprocal | 14.61 Å |
| i0_reciprocal | 2687000.0000 |
| total_estimate | 0.8756 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.4 Å |
| skewness | 0.335 |
| kurtosis | -0.473 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 138900.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.866; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.812; Smooth: 0.968 |