1dec
STRUCTURE OF THE RGD PROTEIN DECORSIN: CONSERVED MOTIF AND DISTINCT FUNCTION IN LEECH PROTEINS THAT AFFECT BLOOD CLOTTING
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dec |
| deposition_date | 1994-05-17 |
| title | STRUCTURE OF THE RGD PROTEIN DECORSIN: CONSERVED MOTIF AND DISTINCT FUNCTION IN LEECH PROTEINS THAT AFFECT BLOOD CLOTTING |
| keywords | BLOOD COAGULATION; BLOOD COAGULATION |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 9.73 Å |
| rg_electron | 10.02 Å |
| i0 | 229832000.00 |
| molecular_weight | 109520.0 kDa |
| excluded_volume | 129320 ų |
| envelope_volume | 10099 ų |
| shell_volume | 7785 ų |
| envelope_diameter | 43.6 Å |
| shell_rg | 16.67 Å |
| envelope_rg | 12.54 Å |
| shape_rg | 10.06 Å |
| total_rg | 10.05 Å |
| total_atoms | 14250 |
| n_residues | 975 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 25.5 Å |
| rg_real | 9.25 Å |
| rg_real_error | 0.03 Å |
| i0_real | 2.1970e+08 |
| i0_real_error | 1.3430e+06 |
| rg_reciprocal | 9.81 Å |
| i0_reciprocal | 229800000.0000 |
| total_estimate | 0.6836 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 0 |
| r_peak_primary | — Å |
| skewness | 0.277 |
| kurtosis | -0.514 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 6.2200 |
| highest_alpha | 29310.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.999; Stabil: 0.966; Sysdev: 0.000; Positv: 1.000; Valcen: 0.994; Smooth: 0.000 |