1dlp

STRUCTURAL CHARACTERIZATION OF THE NATIVE FETUIN-BINDING PROTEIN SCILLA CAMPANULATA AGGLUTININ (SCAFET): A NOVEL TWO-DOMAIN LECTIN

Method: X-RAY DIFFRACTION

1. 蛋白身份与相关结构 Protein Identity & Related Structures

LECTIN SCAFET PRECURSOR

物种未注明

UniProt Q9ZP48

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 6 water × 6 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 Q9ZP48_HYAHI
Isoform
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–236; UniProt 22–257 作者链 B; PDB构建体 1–236; UniProt 22–257 作者链 C; PDB构建体 1–236; UniProt 22–257 作者链 D; PDB构建体 1–236; UniProt 22–257 作者链 E; PDB构建体 1–236; UniProt 22–257 作者链 F; PDB构建体 1–236; UniProt 22–257

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

2. 结构基本信息 2. Structure Basics

条目编号 entry_id1dlp
沉积日期 deposition_date1999-12-11
结构标题 titleSTRUCTURAL CHARACTERIZATION OF THE NATIVE FETUIN-BINDING PROTEIN SCILLA CAMPANULATA AGGLUTININ (SCAFET): A NOVEL TWO-DOMAIN LECTIN
关键词 keywordsTWO-DOMAIN LECTIN, BETA PRISM II FOLD, NATIVE, SUGAR BINDING PROTEIN; SUGAR BINDING PROTEIN
实验方法 methodX-RAY DIFFRACTION

3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1dlp__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1dlp__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

1dlp__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)39.99 Å
Rg(电子密度)39.08 Å
总 Rg39.63 Å
原子数10364
残基数1358
排除体积181790 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 1dlp__assembly_1__model_1 hexameric (6) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载

4. 晶体学与实验 4. Crystallography & Experiment

5. 实体与聚合物信息 Entities & Polymers (2)

6. 折叠分类 (SCOP + CATH) 24 domains

SCOP 2.08 (12 domains)

结构域编号 domain_idd1dlpa1
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpa2
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpb1
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpb2
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpc1
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpc2
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpd1
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpd2
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpe1
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpe2
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpf1
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins
结构域编号 domain_idd1dlpf2
类 Class classb — All beta proteins
折叠类型 Fold foldb.78 — beta-Prism II
超家族 Superfamily superfamilyb.78.1 — alpha-D-mannose-specific plant lectins
家族 Family familyb.78.1.1 — alpha-D-mannose-specific plant lectins

CATH v4.4 (12 domains)

结构域编号 domain_id1dlpA01
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpA02
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpB01
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpB02
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpC01
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpC02
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpD01
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpD02
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpE01
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpE02
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpF01
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain
结构域编号 domain_id1dlpF02
类 Class class2 — Mainly Beta
架构 Architecture architecture90 — Orthogonal Prism
拓扑 Topology topology10 — Agglutinin, subunit A
同源超家族 H-superfamily homologous superfamily10 — Bulb-type lectin domain

7. 引用文献 (3)