1dn8
;STRUCTURE OF A Z-DNA WITH TWO DIFFERENT BACKBONE CHAIN CONFORMATIONS. STABILIZATION OF THE DECADEOXYOLIGONUCLEOTIDE D(CGTACGTACG) BY (CO(NH3)6)3+ BINDING TO THE GUANINE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dn8 |
| deposition_date | 1987-05-12 |
| title | ;STRUCTURE OF A Z-DNA WITH TWO DIFFERENT BACKBONE CHAIN CONFORMATIONS. STABILIZATION OF THE DECADEOXYOLIGONUCLEOTIDE D(CGTACGTACG) BY (CO(NH3)6)3+ BINDING TO THE GUANINE ; |
| keywords | Z-DNA, DOUBLE HELIX, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 7.65 Å |
| rg_electron | 6.64 Å |
| i0 | 150677.00 |
| molecular_weight | 1432.0 kDa |
| excluded_volume | 1372 ų |
| envelope_volume | 1677 ų |
| shell_volume | 2694 ų |
| envelope_diameter | 22.3 Å |
| shell_rg | 10.38 Å |
| envelope_rg | 6.95 Å |
| shape_rg | 6.39 Å |
| total_rg | 8.01 Å |
| total_atoms | 91 |
| n_residues | 4 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 25.7 Å |
| rg_real | 7.67 Å |
| rg_real_error | 0.36 Å |
| i0_real | 1.5070e+05 |
| i0_real_error | 1.5260e+03 |
| rg_reciprocal | 7.67 Å |
| i0_reciprocal | 150700.0000 |
| total_estimate | 0.8857 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 8.1 Å |
| skewness | 0.325 |
| kurtosis | -0.427 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 2792.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.917; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.832; Smooth: 0.929 |