物种未注明
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白单体 | 单体 | 蛋白 1 | FLAVIN-ADENINE DINUCLEOTIDE × 1 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID × 1 water × 1 | 与蛋白数一致 |
| 2 | 蛋白单体 | 单体 | 蛋白 1 | FLAVIN-ADENINE DINUCLEOTIDE × 1 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID × 1 water × 1 | 与蛋白数一致 |
| UniProt名称 | PHR_ECOLI |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–471； UniProt 2–472 作者链 B； PDB构建体 1–471； UniProt 2–472 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 1dnp |
| 沉积日期 deposition_date | 1995-07-03 |
| 结构标题 title | STRUCTURE OF DEOXYRIBODIPYRIMIDINE PHOTOLYASE |
| 关键词 keywords | DNA REPAIR, ELECTRON TRANSFER, EXCITATION ENERGY TRANSFER, LYASE, CARBON-CARBON, LYASE (CARBON-CARBON); LYASE (CARBON-CARBON) |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 2 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 24.16 Å |
| Rg（电子密度） | 23.41 Å |
| 总 Rg | 24.32 Å |
| 原子数 | 3854 |
| 残基数 | 469 |
| 排除体积 | 67767 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d1dnpa1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.99 — Cryptochrome/photolyase FAD-binding domain |
| 超家族 Superfamily superfamily | a.99.1 — Cryptochrome/photolyase FAD-binding domain |
| 家族 Family family | a.99.1.1 — Cryptochrome/photolyase FAD-binding domain |
| 结构域编号 domain_id | d1dnpa2 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.28 — Cryptochrome/photolyase, N-terminal domain |
| 超家族 Superfamily superfamily | c.28.1 — Cryptochrome/photolyase, N-terminal domain |
| 家族 Family family | c.28.1.1 — Cryptochrome/photolyase, N-terminal domain |
| 结构域编号 domain_id | d1dnpb1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.99 — Cryptochrome/photolyase FAD-binding domain |
| 超家族 Superfamily superfamily | a.99.1 — Cryptochrome/photolyase FAD-binding domain |
| 家族 Family family | a.99.1.1 — Cryptochrome/photolyase FAD-binding domain |
| 结构域编号 domain_id | d1dnpb2 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.28 — Cryptochrome/photolyase, N-terminal domain |
| 超家族 Superfamily superfamily | c.28.1 — Cryptochrome/photolyase, N-terminal domain |
| 家族 Family family | c.28.1.1 — Cryptochrome/photolyase, N-terminal domain |
| 结构域编号 domain_id | 1dnpA01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 620 — HUPs |
| 结构域编号 domain_id | 1dnpA02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 25 — Alpha Horseshoe |
| 拓扑 Topology topology | 40 — Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat |
| 同源超家族 H-superfamily homologous superfamily | 80 — |
| 结构域编号 domain_id | 1dnpA03 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 579 — DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3 |
| 同源超家族 H-superfamily homologous superfamily | 10 — DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 |
| 结构域编号 domain_id | 1dnpB01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 620 — HUPs |
| 结构域编号 domain_id | 1dnpB02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 25 — Alpha Horseshoe |
| 拓扑 Topology topology | 40 — Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat |
| 同源超家族 H-superfamily homologous superfamily | 80 — |
| 结构域编号 domain_id | 1dnpB03 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 579 — DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3 |
| 同源超家族 H-superfamily homologous superfamily | 10 — DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 |