1dpl
;A-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dpl |
| deposition_date | 1999-12-27 |
| title | ;A-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINE ; |
| keywords | MODIFIED A-DECAMER AT 0.83 A RESOLUTION, DEOXYRIBONUCLEIC ACID, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.02 Å |
| rg_electron | 11.53 Å |
| i0 | 2079020.00 |
| molecular_weight | 6521.0 kDa |
| excluded_volume | 6580 ų |
| envelope_volume | 8618 ų |
| shell_volume | 6972 ų |
| envelope_diameter | 42.6 Å |
| shell_rg | 15.93 Å |
| envelope_rg | 11.62 Å |
| shape_rg | 11.39 Å |
| total_rg | 12.54 Å |
| total_atoms | 434 |
| n_residues | 18 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 43.7 Å |
| rg_real | 11.98 Å |
| rg_real_error | 0.42 Å |
| i0_real | 2.0790e+06 |
| i0_real_error | 2.4320e+04 |
| rg_reciprocal | 11.99 Å |
| i0_reciprocal | 2079000.0000 |
| total_estimate | 0.8310 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 15.5 Å |
| skewness | 0.252 |
| kurtosis | -0.118 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 94090.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.619; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.955; Smooth: 0.988 |