1dpn
;B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dpn |
| deposition_date | 1999-12-27 |
| title | ;B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE ; |
| keywords | 0.95 A RESOLUTION STRUCTURE, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.60 Å |
| rg_electron | 13.13 Å |
| i0 | 2900470.00 |
| molecular_weight | 7448.0 kDa |
| excluded_volume | 7184 ų |
| envelope_volume | 9951 ų |
| shell_volume | 7242 ų |
| envelope_diameter | 45.7 Å |
| shell_rg | 17.12 Å |
| envelope_rg | 13.37 Å |
| shape_rg | 13.02 Å |
| total_rg | 13.90 Å |
| total_atoms | 492 |
| n_residues | 22 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 46.9 Å |
| rg_real | 13.68 Å |
| rg_real_error | 0.32 Å |
| i0_real | 2.9000e+06 |
| i0_real_error | 3.3040e+04 |
| rg_reciprocal | 13.67 Å |
| i0_reciprocal | 2900000.0000 |
| total_estimate | 0.8582 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 14.2 Å |
| skewness | 0.458 |
| kurtosis | -0.258 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 216700.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.798; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.822; Smooth: 0.936 |