1dqf
CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dqf |
| deposition_date | 2000-01-04 |
| title | CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS |
| keywords | DOUBLE HELIX, CYTOSINE BULGE, RNA; RNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.01 Å |
| rg_electron | 11.44 Å |
| i0 | 2087430.00 |
| molecular_weight | 6100.0 kDa |
| excluded_volume | 5778 ų |
| envelope_volume | 7744 ų |
| shell_volume | 6414 ų |
| envelope_diameter | 40.7 Å |
| shell_rg | 15.88 Å |
| envelope_rg | 11.50 Å |
| shape_rg | 11.25 Å |
| total_rg | 12.44 Å |
| total_atoms | 401 |
| n_residues | 19 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 39.9 Å |
| rg_real | 11.99 Å |
| rg_real_error | 0.33 Å |
| i0_real | 2.0870e+06 |
| i0_real_error | 2.2230e+04 |
| rg_reciprocal | 11.99 Å |
| i0_reciprocal | 2087000.0000 |
| total_estimate | 0.7862 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 15.7 Å |
| skewness | 0.264 |
| kurtosis | -0.204 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 64440.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.745; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.988; Smooth: 0.000 |