1dsd
;NMR STUDY OF DNA (5'-D(*GP*AP*TP*GP*CP*TP*TP*C)-3') T:T MISMATCHED DUPLEX COMPLEXED WITH ACTINOMYCIN D, MINIMIZED AVERAGE STRUCTURE ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dsd |
| deposition_date | 1996-08-10 |
| title | ;NMR STUDY OF DNA (5'-D(*GP*AP*TP*GP*CP*TP*TP*C)-3') T:T MISMATCHED DUPLEX COMPLEXED WITH ACTINOMYCIN D, MINIMIZED AVERAGE STRUCTURE ; |
| keywords | ACTINOMYCIN D, ACTINOMYCIN, ANTIBIOTIC, ANTI CANCER, ANTITUMOR, CHROMOPHORE, DEPSIPEPTIDE, T:T MISMATCH, DNA-ANTIBIOTIC COMPLEX; DNA/ANTIBIOTIC |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 11.65 Å |
| rg_electron | 10.60 Å |
| i0 | 1525760.00 |
| molecular_weight | 6078.0 kDa |
| excluded_volume | 6441 ų |
| envelope_volume | 7048 ų |
| shell_volume | 6196 ų |
| envelope_diameter | 36.5 Å |
| shell_rg | 15.36 Å |
| envelope_rg | 11.14 Å |
| shape_rg | 10.46 Å |
| total_rg | 11.74 Å |
| total_atoms | 682 |
| n_residues | 20 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 38.5 Å |
| rg_real | 11.67 Å |
| rg_real_error | 0.26 Å |
| i0_real | 1.5260e+06 |
| i0_real_error | 1.6040e+04 |
| rg_reciprocal | 11.67 Å |
| i0_reciprocal | 1526000.0000 |
| total_estimate | 0.8944 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 12.7 Å |
| skewness | 0.336 |
| kurtosis | -0.383 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 97390.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.910; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.929; Smooth: 0.966 |