Crystal structure of Fab13B5 against HIV-1 capsid protein p24

entry_id	1e6o
deposition_date	2000-08-21
title	Crystal structure of Fab13B5 against HIV-1 capsid protein p24
keywords	IMMUNOGLOBULIN, FAB, ANTIBODY, ANTIGEN, HIV-1, P24, CA; IMMUNOGLOBULIN
method	X-RAY DIFFRACTION

rg_guinier	25.09 Å
rg_electron	24.15 Å
i0	37057300.00
molecular_weight	46553.0 kDa
excluded_volume	57929 ų
envelope_volume	71329 ų
shell_volume	24756 ų
envelope_diameter	79.9 Å
shell_rg	31.29 Å
envelope_rg	23.80 Å
shape_rg	24.13 Å
total_rg	24.99 Å
total_atoms	3276
n_residues	429
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	77.8 Å
rg_real	25.05 Å
rg_real_error	0.46 Å
i0_real	3.7060e+07
i0_real_error	5.2720e+05
rg_reciprocal	25.06 Å
i0_reciprocal	37060000.0000
total_estimate	0.9127
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	29.6 Å
skewness	0.237
kurtosis	-0.555
angular_range	— – 0.3150 Å−1
current_alpha	0.0000
highest_alpha	8258000.0000
n_real_points	64
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.966; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.988; Smooth: 0.975

Unit Cell

length_a	36.680 Å
length_b	81.900 Å
length_c	134.400 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

Symmetry

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

Refinement

resolution	1.800 Å
resolution_low	15.000 Å
r_factor	0.2250
r_work	0.2250
r_free	0.2550

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/e6/1e6o/pr_distribution.json
• pr_output /app/data/pr_computation/e6/1e6o/1e6o.pr.out
• pr_plot /app/data/visualization/pr_computation/e6/1e6o/1e6o_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/e6/1e6o/1e6o.dat
• saxs_fit /app/data/saxs_computation/e6/1e6o/1e6o.fit
• saxs_log /app/data/saxs_computation/e6/1e6o/1e6o.log
• saxs_plot /app/data/visualization/saxs_computation/e6/1e6o/1e6o_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/e6/1e6o/1e6o.fit
pddf	/app/data/pr_computation/e6/1e6o/1e6o.pr.out
profile	/app/data/saxs_computation/e6/1e6o/1e6o.dat