1esy
NMR STRUCTURE OF STEM LOOP SL2 OF THE HIV-1 PSI RNA PACKAGING SIGNAL REVEALS A NOVEL A-U-A BASE-TRIPLE PLATFORM
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1esy |
| deposition_date | 2000-04-11 |
| title | NMR STRUCTURE OF STEM LOOP SL2 OF THE HIV-1 PSI RNA PACKAGING SIGNAL REVEALS A NOVEL A-U-A BASE-TRIPLE PLATFORM |
| keywords | HIV-1, RNA, Splice-donor site, platform motif; RNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 11.89 Å |
| rg_electron | 11.91 Å |
| i0 | 679729000.00 |
| molecular_weight | 124260.0 kDa |
| excluded_volume | 115370 ų |
| envelope_volume | 14549 ų |
| shell_volume | 9333 ų |
| envelope_diameter | 48.1 Å |
| shell_rg | 18.76 Å |
| envelope_rg | 15.00 Å |
| shape_rg | 11.81 Å |
| total_rg | 12.16 Å |
| total_atoms | 12320 |
| n_residues | 380 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 46.0 Å |
| rg_real | 11.97 Å |
| rg_real_error | 0.42 Å |
| i0_real | 6.7970e+08 |
| i0_real_error | 7.7820e+06 |
| rg_reciprocal | 11.96 Å |
| i0_reciprocal | 679700000.0000 |
| total_estimate | 0.7124 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 13.4 Å |
| skewness | 0.562 |
| kurtosis | 0.212 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 92310.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.545; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.622; Smooth: 0.000 |