1h64

CRYSTAL STRUCTURE OF THE SM-RELATED PROTEIN OF P. ABYSSI: THE BIOLOGICAL UNIT IS A HEPTAMER

Method: X-RAY DIFFRACTION

1. 蛋白身份与相关结构 Protein Identity & Related Structures

SNRNP SM-LIKE PROTEIN

PYROCOCCUS ABYSSI

UniProt Q9V0Y8

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 7 water × 7 与蛋白数一致
2 蛋白同源多聚体 同源多聚体 蛋白 7 water × 7 与蛋白数一致
3 蛋白同源多聚体 同源多聚体 蛋白 7 water × 7 与蛋白数一致
4 蛋白同源多聚体 同源多聚体 蛋白 7 water × 7 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 RUXX_PYRAB
Isoform
PDB实体 1
链与序列区间 作者链 1; PDB构建体 1–75; UniProt 1–75 作者链 2; PDB构建体 1–75; UniProt 1–75 作者链 A; PDB构建体 1–75; UniProt 1–75 作者链 B; PDB构建体 1–75; UniProt 1–75 作者链 C; PDB构建体 1–75; UniProt 1–75 作者链 D; PDB构建体 1–75; UniProt 1–75 作者链 E; PDB构建体 1–75; UniProt 1–75 作者链 F; PDB构建体 1–75; UniProt 1–75 作者链 G; PDB构建体 1–75; UniProt 1–75 作者链 H; PDB构建体 1–75; UniProt 1–75 作者链 I; PDB构建体 1–75; UniProt 1–75 作者链 J; PDB构建体 1–75; UniProt 1–75 作者链 K; PDB构建体 1–75; UniProt 1–75 作者链 L; PDB构建体 1–75; UniProt 1–75 作者链 M; PDB构建体 1–75; UniProt 1–75 作者链 N; PDB构建体 1–75; UniProt 1–75 作者链 O; PDB构建体 1–75; UniProt 1–75 作者链 P; PDB构建体 1–75; UniProt 1–75 作者链 Q; PDB构建体 1–75; UniProt 1–75 作者链 R; PDB构建体 1–75; UniProt 1–75 作者链 S; PDB构建体 1–75; UniProt 1–75 作者链 T; PDB构建体 1–75; UniProt 1–75 作者链 U; PDB构建体 1–75; UniProt 1–75 作者链 V; PDB构建体 1–75; UniProt 1–75 作者链 W; PDB构建体 1–75; UniProt 1–75 作者链 X; PDB构建体 1–75; UniProt 1–75 作者链 Y; PDB构建体 1–75; UniProt 1–75 作者链 Z; PDB构建体 1–75; UniProt 1–75

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

2. 结构基本信息 2. Structure Basics

条目编号 entry_id1h64
沉积日期 deposition_date2001-06-05
结构标题 titleCRYSTAL STRUCTURE OF THE SM-RELATED PROTEIN OF P. ABYSSI: THE BIOLOGICAL UNIT IS A HEPTAMER
关键词 keywordsSM-LIKE PROTEIN, SM FOLD, SPLICEOSOME, SNRNP CORE; SM-LIKE PROTEIN
实验方法 methodX-RAY DIFFRACTION

3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1h64__assembly_3__model_1

Assembly 3 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1h64__assembly_3__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

1h64__assembly_3__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)25.87 Å
Rg(电子密度)24.47 Å
总 Rg25.33 Å
原子数3955
残基数497
排除体积71559 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 1h64__assembly_1__model_1 heptameric (7) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
2 1 1h64__assembly_2__model_1 heptameric (7) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
3 1 1h64__assembly_3__model_1 heptameric (7) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
4 1 1h64__assembly_4__model_1 heptameric (7) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载

4. 晶体学与实验 4. Crystallography & Experiment

5. 实体与聚合物信息 Entities & Polymers (2)

6. 折叠分类 (SCOP + CATH) 56 domains

SCOP 2.08 (28 domains)

结构域编号 domain_idd1h641_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h642_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64a_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64b_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64c_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64d_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64e_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64f_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64g_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64h_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64i_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64j_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64k_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64l_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64m_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64n_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64o_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64p_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64q_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64r_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64s_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64t_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64u_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64v_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64w_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64x_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64y_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP
结构域编号 domain_idd1h64z_
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.1 — Sm motif of small nuclear ribonucleoproteins, SNRNP

CATH v4.4 (28 domains)

结构域编号 domain_id1h64100
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64200
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64A00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64B00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64C00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64D00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64E00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64F00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64G00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64H00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64I00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64J00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64K00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64L00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64M00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64N00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64O00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64P00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64Q00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64R00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64S00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64T00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64U00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64V00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64W00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64X00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64Y00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100
结构域编号 domain_id1h64Z00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily100

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