1ipj

CRYSTAL STRUCTURES OF RECOMBINANT AND NATIVE SOYBEAN BETA-CONGLYCININ BETA HOMOTRIMERS COMPLEXES WITH N-ACETYL-D-GLUCOSAMINE

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

BETA-CONGLYCININ, BETA CHAIN

物种未注明

UniProt P25974

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 3 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 GLCB_SOYBN
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–416; UniProt 24–439 作者链 B; PDB构建体 1–416; UniProt 24–439 作者链 C; PDB构建体 1–416; UniProt 24–439

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id1ipj
沉积日期 deposition_date2001-05-16
结构标题 titleCRYSTAL STRUCTURES OF RECOMBINANT AND NATIVE SOYBEAN BETA-CONGLYCININ BETA HOMOTRIMERS COMPLEXES WITH N-ACETYL-D-GLUCOSAMINE
关键词 keywordssoybean, storage protein, vicilin, SUGAR BINDING PROTEIN; SUGAR BINDING PROTEIN
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1ipj__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1ipj__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

1ipj__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)34.32 Å
Rg(电子密度)32.99 Å
总 Rg33.66 Å
原子数8881
残基数1088
排除体积156810 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 1ipj__assembly_1__model_1 trimeric (3) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (2)

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6. 折叠分类 (SCOP + CATH) 12 domains

SCOP 2.08 (6 domains)

结构域编号 domain_idd1ipja1
类 Class classb — All beta proteins
折叠类型 Fold foldb.82 — Double-stranded beta-helix
超家族 Superfamily superfamilyb.82.1 — RmlC-like cupins
家族 Family familyb.82.1.2 — Germin/Seed storage 7S protein
结构域编号 domain_idd1ipja2
类 Class classb — All beta proteins
折叠类型 Fold foldb.82 — Double-stranded beta-helix
超家族 Superfamily superfamilyb.82.1 — RmlC-like cupins
家族 Family familyb.82.1.2 — Germin/Seed storage 7S protein
结构域编号 domain_idd1ipjb1
类 Class classb — All beta proteins
折叠类型 Fold foldb.82 — Double-stranded beta-helix
超家族 Superfamily superfamilyb.82.1 — RmlC-like cupins
家族 Family familyb.82.1.2 — Germin/Seed storage 7S protein
结构域编号 domain_idd1ipjb2
类 Class classb — All beta proteins
折叠类型 Fold foldb.82 — Double-stranded beta-helix
超家族 Superfamily superfamilyb.82.1 — RmlC-like cupins
家族 Family familyb.82.1.2 — Germin/Seed storage 7S protein
结构域编号 domain_idd1ipjc1
类 Class classb — All beta proteins
折叠类型 Fold foldb.82 — Double-stranded beta-helix
超家族 Superfamily superfamilyb.82.1 — RmlC-like cupins
家族 Family familyb.82.1.2 — Germin/Seed storage 7S protein
结构域编号 domain_idd1ipjc2
类 Class classb — All beta proteins
折叠类型 Fold foldb.82 — Double-stranded beta-helix
超家族 Superfamily superfamilyb.82.1 — RmlC-like cupins
家族 Family familyb.82.1.2 — Germin/Seed storage 7S protein

CATH v4.4 (6 domains)

结构域编号 domain_id1ipjA01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily10 — Jelly Rolls
结构域编号 domain_id1ipjA02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily10 — Jelly Rolls
结构域编号 domain_id1ipjB01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily10 — Jelly Rolls
结构域编号 domain_id1ipjB02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily10 — Jelly Rolls
结构域编号 domain_id1ipjC01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily10 — Jelly Rolls
结构域编号 domain_id1ipjC02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily10 — Jelly Rolls
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7. 引用文献 (1)