Haemophilus influenzae Rd
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein homooligomer | Homooligomer | Protein 2 | water × 2 | Consistent with protein count |
| UniProt name | Y766_HAEIN |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–160； UniProt 1–160 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 1j85 |
| Deposition date deposition_date | 2001-05-20 |
| Structure title title | Structure of YibK from Haemophilus influenzae (HI0766), a truncated sequence homolog of tRNA (guanosine-2'-O-) methyltransferase (SpoU) |
| Keywords keywords | methyltransferase, structural genomics, hypothetical protein, Structure 2 Function Project, S2F, TRANSFERASE; TRANSFERASE |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 20.33 Å |
| Rg (electron density) | 19.32 Å |
| Total Rg | 20.32 Å |
| Atom count | 2520 |
| Residues | 312 |
| Excluded volume | 45215 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d1j85a_ |
| Class class | c — Alpha and beta proteins (a/b) |
| Fold Fold fold | c.116 — alpha/beta knot |
| Superfamily Superfamily superfamily | c.116.1 — alpha/beta knot |
| Family Family family | c.116.1.1 — SpoU-like RNA 2'-O ribose methyltransferase |
| Domain ID domain_id | 1j85A00 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| Topology topology | 1280 — Alpha/beta knot |
| Homologous superfamily homologous superfamily | 10 — SPOUT methyltransferase, trefoil knot domain |