1jhn

Crystal Structure of the Lumenal Domain of Calnexin

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

calnexin

Canis lupus familiaris

UniProt P24643

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 CALCIUM ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CALX_CANFA
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–424; UniProt 45–468

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1jhn
Deposition date deposition_date2001-06-28
Structure title titleCrystal Structure of the Lumenal Domain of Calnexin
Keywords keywordsjelly-roll, beta sandwich, CHAPERONE; CHAPERONE
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1jhn__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1jhn__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1jhn__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)34.30 Å
Rg (electron density)33.75 Å
Total Rg34.16 Å
Atom count2854
Residues380
Excluded volume49720 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1jhn__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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6. Fold Classification (SCOP + CATH) 4 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd1jhna3
Class classb — All beta proteins
Fold Fold foldb.104 — P-domain of calnexin/calreticulin
Superfamily Superfamily superfamilyb.104.1 — P-domain of calnexin/calreticulin
Family Family familyb.104.1.1 — P-domain of calnexin/calreticulin
Domain ID domain_idd1jhna4
Class classb — All beta proteins
Fold Fold foldb.29 — Concanavalin A-like lectins/glucanases
Superfamily Superfamily superfamilyb.29.1 — Concanavalin A-like lectins/glucanases
Family Family familyb.29.1.12 — Calnexin/calreticulin

CATH v4.4 (2 domains)

Domain ID domain_id1jhnA01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily200 —
Domain ID domain_id1jhnA02
Class class2 — Mainly Beta
Architecture architecture10 — Ribbon
Topology topology250 — Calnexin lumenal domain, non-globular proline-rich hairpin domain
Homologous superfamily homologous superfamily10 — Calreticulin/calnexin, P domain
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7. Citations (2)