1jju

Structure of a Quinohemoprotein Amine Dehydrogenase with a Unique Redox Cofactor and Highly Unusual Crosslinking

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

QUINOHEMOPROTEIN AMINE DEHYDROGENASE

物种未注明

UniProt Q8VUT0

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 3 QUINOHEMOPROTEIN AMINE DEHYDROGENASE × 1 (Q8VUS7) QUINOHEMOPROTEIN AMINE DEHYDROGENASE × 1 (Q8VUS8) PROTOPORPHYRIN IX CONTAINING FE × 2 TERTIARY-BUTYL ALCOHOL × 3 SODIUM ION × 1 water × 3 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 Q8VUT0_PARDE
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–489; UniProt 24–512

QUINOHEMOPROTEIN AMINE DEHYDROGENASE

物种未注明

UniProt Q8VUS7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 3 QUINOHEMOPROTEIN AMINE DEHYDROGENASE × 1 (Q8VUT0) QUINOHEMOPROTEIN AMINE DEHYDROGENASE × 1 (Q8VUS8) PROTOPORPHYRIN IX CONTAINING FE × 2 TERTIARY-BUTYL ALCOHOL × 3 SODIUM ION × 1 water × 3 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 Q8VUS7_PARDE
Isoform —
PDB实体 2
链与序列区间 作者链 B; PDB构建体 1–337; UniProt 22–358

QUINOHEMOPROTEIN AMINE DEHYDROGENASE

物种未注明

UniProt Q8VUS8

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 3 QUINOHEMOPROTEIN AMINE DEHYDROGENASE × 1 (Q8VUT0) QUINOHEMOPROTEIN AMINE DEHYDROGENASE × 1 (Q8VUS7) PROTOPORPHYRIN IX CONTAINING FE × 2 TERTIARY-BUTYL ALCOHOL × 3 SODIUM ION × 1 water × 3 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 QADG_PARDE
Isoform —
PDB实体 3
链与序列区间 作者链 C; PDB构建体 1–79; UniProt 1–79

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id1jju
沉积日期 deposition_date2001-07-09
结构标题 titleStructure of a Quinohemoprotein Amine Dehydrogenase with a Unique Redox Cofactor and Highly Unusual Crosslinking
关键词 keywordsQUINOHEMOPROTEIN, AMINE DEHYDROGENASE, ELECTRON TRANSPORT PROTEIN; ELECTRON TRANSPORT PROTEIN
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1jju__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1jju__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

1jju__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)31.01 Å
Rg(电子密度)30.41 Å
总 Rg31.04 Å
原子数7026
残基数904
排除体积124070 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 1jju__assembly_1__model_1 trimeric (3) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (7)

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6. 折叠分类 (SCOP + CATH) 12 domains

SCOP 2.08 (7 domains)

结构域编号 domain_idd1jjua1
类 Class classa — All alpha proteins
折叠类型 Fold folda.3 — Cytochrome c
超家族 Superfamily superfamilya.3.1 — Cytochrome c
家族 Family familya.3.1.7 — Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
结构域编号 domain_idd1jjua2
类 Class classa — All alpha proteins
折叠类型 Fold folda.3 — Cytochrome c
超家族 Superfamily superfamilya.3.1 — Cytochrome c
家族 Family familya.3.1.7 — Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
结构域编号 domain_idd1jjua3
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.18 — E set domains
家族 Family familyb.1.18.14 — Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5
结构域编号 domain_idd1jjua4
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.18 — E set domains
家族 Family familyb.1.18.14 — Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5
结构域编号 domain_idd1jjua5
类 Class classb — All beta proteins
折叠类型 Fold foldb.61 — Streptavidin-like
超家族 Superfamily superfamilyb.61.4 — Quinohemoprotein amine dehydrogenase A chain, domain 3
家族 Family familyb.61.4.1 — Quinohemoprotein amine dehydrogenase A chain, domain 3
结构域编号 domain_idd1jjub_
类 Class classb — All beta proteins
折叠类型 Fold foldb.69 — 7-bladed beta-propeller
超家族 Superfamily superfamilyb.69.2 — YVTN repeat-like/Quinoprotein amine dehydrogenase
家族 Family familyb.69.2.2 — Quinohemoprotein amine dehydrogenase B chain
结构域编号 domain_idd1jjuc_
类 Class classa — All alpha proteins
折叠类型 Fold folda.137 — Non-globular all-alpha subunits of globular proteins
超家族 Superfamily superfamilya.137.9 — Quinohemoprotein amine dehydrogenase C chain
家族 Family familya.137.9.1 — Quinohemoprotein amine dehydrogenase C chain

CATH v4.4 (5 domains)

结构域编号 domain_id1jjuA02
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology128 — Lipocalin
同源超家族 H-superfamily homologous superfamily120 — Quinohemoprotein amine dehydrogenase alpha subunit, domain 2
结构域编号 domain_id1jjuA03
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1jjuA04
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1jjuB00
类 Class class2 — Mainly Beta
架构 Architecture architecture130 — 7 Propeller
拓扑 Topology topology10 — Methylamine Dehydrogenase; Chain H
同源超家族 H-superfamily homologous superfamily10 — YVTN repeat-like/Quinoprotein amine dehydrogenase
结构域编号 domain_id1jjuC00
类 Class class4 — Few Secondary Structures
架构 Architecture architecture10 — Irregular
拓扑 Topology topology940 — Quinohemoprotein amine dehydrogenase
同源超家族 H-superfamily homologous superfamily10 — Quinohemoprotein amine dehydrogenase, gamma subunit structural domain
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7. 引用文献 (1)