1jmm

Crystal structure of the V-region of Streptococcus mutans antigen I/II

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

protein I/II V-region

Streptococcus mutans

UniProt P11657

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 SODIUM ION × 1 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PAC_STRMU
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–377; UniProt 463–839

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1jmm
Deposition date deposition_date2001-07-19
Structure title titleCrystal structure of the V-region of Streptococcus mutans antigen I/II
Keywords keywordsAntigen I/II, V-region, IMMUNE SYSTEM, MEMBRANE PROTEIN; IMMUNE SYSTEM, MEMBRANE PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1jmm__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1jmm__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1jmm__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)22.41 Å
Rg (electron density)21.64 Å
Total Rg22.50 Å
Atom count2909
Residues370
Excluded volume51607 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1jmm__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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6. Fold Classification (SCOP + CATH) 3 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1jmma_
Class classb — All beta proteins
Fold Fold foldb.30 — Supersandwich
Superfamily Superfamily superfamilyb.30.6 — V-region of surface antigen I/II (SA I/II, PAC)
Family Family familyb.30.6.1 — V-region of surface antigen I/II (SA I/II, PAC)

CATH v4.4 (2 domains)

Domain ID domain_id1jmmA01
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily250 —
Domain ID domain_id1jmmA02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology530 — Major cell-surface adhesin PAc
Homologous superfamily homologous superfamily10 — Major cell-surface adhesin PAc
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7. Citations (1)