1jnz

Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6 resolution

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

当前条目没有可用的 UniProt 蛋白身份。

七张关系表仍保留该条目的 assembly 与组成信息,但缺少统一蛋白身份时,不能可靠建立跨 PDB 的同蛋白链接。

当前条目的 assembly 组成

Assembly 物理组成 蛋白状态 蛋白 / DNA / RNA / 其他聚合物 数据核对
1 蛋白异源复合物 异源复合物 4 / 0 / 0 / 0 与蛋白数一致

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id1jnz
沉积日期 deposition_date2001-07-26
结构标题 titleStructure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6 resolution
关键词 keywordssulfur metabolism, adenylylsulfate reductase, iron-sulfur flavoprotein, catalysis, OXIDOREDUCTASE; OXIDOREDUCTASE
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1jnz__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1jnz__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

1jnz__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)34.39 Å
Rg(电子密度)33.92 Å
总 Rg34.40 Å
原子数12816
残基数1582
排除体积228910 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 1jnz__assembly_1__model_1 tetrameric (4) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (6)

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6. 折叠分类 (SCOP + CATH) 18 domains

SCOP 2.08 (8 domains)

结构域编号 domain_idd1jnza1
类 Class classa — All alpha proteins
折叠类型 Fold folda.7 — Spectrin repeat-like
超家族 Superfamily superfamilya.7.3 — Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
家族 Family familya.7.3.1 — Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
结构域编号 domain_idd1jnza2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.3 — FAD/NAD(P)-binding domain
超家族 Superfamily superfamilyc.3.1 — FAD/NAD(P)-binding domain
家族 Family familyc.3.1.4 — Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
结构域编号 domain_idd1jnza3
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.168 — Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
超家族 Superfamily superfamilyd.168.1 — Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
家族 Family familyd.168.1.1 — Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
结构域编号 domain_idd1jnzb_
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.58 — Ferredoxin-like
超家族 Superfamily superfamilyd.58.1 — 4Fe-4S ferredoxins
家族 Family familyd.58.1.5 — Ferredoxin domains from multidomain proteins
结构域编号 domain_idd1jnzc1
类 Class classa — All alpha proteins
折叠类型 Fold folda.7 — Spectrin repeat-like
超家族 Superfamily superfamilya.7.3 — Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
家族 Family familya.7.3.1 — Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
结构域编号 domain_idd1jnzc2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.3 — FAD/NAD(P)-binding domain
超家族 Superfamily superfamilyc.3.1 — FAD/NAD(P)-binding domain
家族 Family familyc.3.1.4 — Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
结构域编号 domain_idd1jnzc3
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.168 — Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
超家族 Superfamily superfamilyd.168.1 — Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
家族 Family familyd.168.1.1 — Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
结构域编号 domain_idd1jnzd_
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.58 — Ferredoxin-like
超家族 Superfamily superfamilyd.58.1 — 4Fe-4S ferredoxins
家族 Family familyd.58.1.5 — Ferredoxin domains from multidomain proteins

CATH v4.4 (10 domains)

结构域编号 domain_id1jnzA01
类 Class class3 — Alpha Beta
架构 Architecture architecture50 — 3-Layer(bba) Sandwich
拓扑 Topology topology50 — FAD/NAD(P)-binding domain
同源超家族 H-superfamily homologous superfamily60 — FAD/NAD(P)-binding domain
结构域编号 domain_id1jnzA02
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology700 — Flavocytochrome C3; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily10 — Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
结构域编号 domain_id1jnzA03
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology58 — Methane Monooxygenase Hydroxylase; Chain G, domain 1
同源超家族 H-superfamily homologous superfamily100 — Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain
结构域编号 domain_id1jnzB01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily20 —
结构域编号 domain_id1jnzB02
类 Class class6 — Special
架构 Architecture architecture20 — Other non-globular
拓扑 Topology topology260 — Signal recognition particle alu RNA binding heterodimer, srp9/1
同源超家族 H-superfamily homologous superfamily10 — Adenylylsulphate reductase, beta subunit, C-terminal domain
结构域编号 domain_id1jnzC01
类 Class class3 — Alpha Beta
架构 Architecture architecture50 — 3-Layer(bba) Sandwich
拓扑 Topology topology50 — FAD/NAD(P)-binding domain
同源超家族 H-superfamily homologous superfamily60 — FAD/NAD(P)-binding domain
结构域编号 domain_id1jnzC02
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology700 — Flavocytochrome C3; Chain A, domain 1
同源超家族 H-superfamily homologous superfamily10 — Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
结构域编号 domain_id1jnzC03
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology58 — Methane Monooxygenase Hydroxylase; Chain G, domain 1
同源超家族 H-superfamily homologous superfamily100 — Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain
结构域编号 domain_id1jnzD01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily20 —
结构域编号 domain_id1jnzD02
类 Class class6 — Special
架构 Architecture architecture20 — Other non-globular
拓扑 Topology topology260 — Signal recognition particle alu RNA binding heterodimer, srp9/1
同源超家族 H-superfamily homologous superfamily10 — Adenylylsulphate reductase, beta subunit, C-terminal domain
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7. 引用文献 (2)