1l3a

Structure of the plant transcriptional regulator PBF-2

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

p24: plant transcriptional regulator PBF-2

Solanum tuberosum

UniProt Q9LL85

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 4 water × 4 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 Q9LL85_SOLTU
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 14–219; UniProt 68–273 作者链 B; PDB构建体 14–219; UniProt 68–273 作者链 C; PDB构建体 14–219; UniProt 68–273 作者链 D; PDB构建体 14–219; UniProt 68–273

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id1l3a
沉积日期 deposition_date2002-02-26
结构标题 titleStructure of the plant transcriptional regulator PBF-2
关键词 keywordsPBF-2, single strand DNA binding protein, plant, whirly, transcriptionnal activator, cyclic C4 symmetry, DNA BINDING PROTEIN; DNA BINDING PROTEIN
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1l3a__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1l3a__assembly_1__model_1 | I(q)

10-2 10-1 106 107 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

1l3a__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)29.22 Å
Rg(电子密度)27.55 Å
总 Rg28.45 Å
原子数5435
残基数689
排除体积97263 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 1l3a__assembly_1__model_1 tetrameric (4) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (2)

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6. 折叠分类 (SCOP + CATH) 9 domains

SCOP 2.08 (5 domains)

结构域编号 domain_idd1l3aa_
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.18 — ssDNA-binding transcriptional regulator domain
超家族 Superfamily superfamilyd.18.1 — ssDNA-binding transcriptional regulator domain
家族 Family familyd.18.1.2 — Plant transcriptional regulator PBF-2
结构域编号 domain_idd1l3ab_
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.18 — ssDNA-binding transcriptional regulator domain
超家族 Superfamily superfamilyd.18.1 — ssDNA-binding transcriptional regulator domain
家族 Family familyd.18.1.2 — Plant transcriptional regulator PBF-2
结构域编号 domain_idd1l3ac1
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.18 — ssDNA-binding transcriptional regulator domain
超家族 Superfamily superfamilyd.18.1 — ssDNA-binding transcriptional regulator domain
家族 Family familyd.18.1.2 — Plant transcriptional regulator PBF-2
结构域编号 domain_idd1l3ac2
类 Class classl — Artifacts
折叠类型 Fold foldl.1 — Tags
超家族 Superfamily superfamilyl.1.1 — Tags
家族 Family familyl.1.1.1 — Tags
结构域编号 domain_idd1l3ad_
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.18 — ssDNA-binding transcriptional regulator domain
超家族 Superfamily superfamilyd.18.1 — ssDNA-binding transcriptional regulator domain
家族 Family familyd.18.1.2 — Plant transcriptional regulator PBF-2

CATH v4.4 (4 domains)

结构域编号 domain_id1l3aA00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology31 — Transcriptional Co-activator pc4; Chain A
同源超家族 H-superfamily homologous superfamily10 — Transcriptional Coactivator Pc4; Chain A
结构域编号 domain_id1l3aB00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology31 — Transcriptional Co-activator pc4; Chain A
同源超家族 H-superfamily homologous superfamily10 — Transcriptional Coactivator Pc4; Chain A
结构域编号 domain_id1l3aC00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology31 — Transcriptional Co-activator pc4; Chain A
同源超家族 H-superfamily homologous superfamily10 — Transcriptional Coactivator Pc4; Chain A
结构域编号 domain_id1l3aD00
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology31 — Transcriptional Co-activator pc4; Chain A
同源超家族 H-superfamily homologous superfamily10 — Transcriptional Coactivator Pc4; Chain A
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7. 引用文献 (1)