Escherichia coli
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein homooligomer | Homooligomer | Protein 3 | MERCURY (II) ION × 3 water × 3 | Consistent with protein count |
| UniProt name | YJGH_ECOLI |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–131； UniProt 1–131 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 1pf5 |
| Deposition date deposition_date | 2003-05-23 |
| Structure title title | Structural Genomics, Protein YJGH |
| Keywords keywords | STRUCTURAL GENOMICS, BETA BARREL, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION; STRUCTURAL GENOMICS, UNKNOWN FUNCTION |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 21.11 Å |
| Rg (electron density) | 19.59 Å |
| Total Rg | 20.50 Å |
| Atom count | 3039 |
| Residues | 390 |
| Excluded volume | 53468 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d1pf5a_ |
| Class class | d — Alpha and beta proteins (a+b) |
| Fold Fold fold | d.79 — Bacillus chorismate mutase-like |
| Superfamily Superfamily superfamily | d.79.1 — YjgF-like |
| Family Family family | d.79.1.1 — YjgF/L-PSP |
| Domain ID domain_id | 1pf5A00 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 30 — 2-Layer Sandwich |
| Topology topology | 1330 — 60s Ribosomal Protein L30; Chain: A; |
| Homologous superfamily homologous superfamily | 40 — RutC-like |