1pp1

Crystal structure of the Borna Disease Virus Nucleoprotein

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

p40 nucleoprotein

Borna disease virus

UniProt Q01552

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 4 water × 4 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NCAP_BDV
Isoform —
PDB entities 1
Chains and sequence ranges Author chain X; PDBConstruct 6–375; UniProt 1–370

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1pp1
Deposition date deposition_date2003-06-16
Structure title titleCrystal structure of the Borna Disease Virus Nucleoprotein
Keywords keywordsRNA VIRUS NUCLEOPROTEIN TETRAMER, Viral protein; VIRAL PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1pp1__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1pp1__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1pp1__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)34.50 Å
Rg (electron density)33.47 Å
Total Rg34.13 Å
Atom count10364
Residues1304
Excluded volume186280 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1pp1__assembly_1__model_1 tetrameric (4) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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6. Fold Classification (SCOP + CATH) 3 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1pp1x_
Class classa — All alpha proteins
Fold Fold folda.206 — P40 nucleoprotein
Superfamily Superfamily superfamilya.206.1 — P40 nucleoprotein
Family Family familya.206.1.1 — P40 nucleoprotein

CATH v4.4 (2 domains)

Domain ID domain_id1pp1X01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology3040 — borna disease virus nucleoprotein, domain 1
Homologous superfamily homologous superfamily10 — borna disease virus nucleoprotein, domain 1
Domain ID domain_id1pp1X02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology3050 — borna disease virus nucleoprotein, domain 2
Homologous superfamily homologous superfamily10 — borna disease virus nucleoprotein, domain 2
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7. Citations (1)