1qun

X-RAY STRUCTURE OF THE FIMC-FIMH CHAPERONE ADHESIN COMPLEX FROM UROPATHOGENIC E.COLI

Method: X-RAY DIFFRACTION Dmax: 307.0 Å Quality: GOOD

SAXS 散射曲线 SAXS Profile

SAXS profile for 1qun

P(r) 距离分布 P(r) Distribution

P(r) distribution for 1qun
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1. 结构基本信息 1. Structure Basics

条目编号 entry_id1qun
沉积日期 deposition_date1999-07-01
结构标题 titleX-RAY STRUCTURE OF THE FIMC-FIMH CHAPERONE ADHESIN COMPLEX FROM UROPATHOGENIC E.COLI
关键词 keywordsCHAPERONE ADHESIN DONOR STRAND COMPLEMENTATION, CHAPERONE-STRUCTURAL PROTEIN COMPLEX; CHAPERONE/STRUCTURAL PROTEIN
实验方法 methodX-RAY DIFFRACTION

2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)

回转半径 Rg (Guinier) rg_guinier91.74
回转半径 Rg (电子) rg_electron92.18
零角强度 I(0) i02250300000.00
分子量 molecular_weight408680.0 kDa
排除体积 excluded_volume513590 ų
包络体积 envelope_volume1074000 ų
水化壳体积 shell_volume100720 ų
包络直径 envelope_diameter276.6
壳层 Rg shell_rg88.51
包络 Rg envelope_rg84.22
形状 Rg shape_rg92.19
总 Rg total_rg92.12
总原子数 total_atoms28800
残基数 n_residues3824
球谐函数阶数 n_harmonics20
q 范围 q_range— – 0.5000 −1
数据点数 n_points101
壳层类型 shell_typedirectional
溶剂电子密度 solvent_density0.3340 e/ų
壳层衬度 contrast_shell0.0300 e/ų
CRYSOL 版本 crysol_version4.1.3

3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)

最大尺寸 Dmax dmax307.0
Rg (实空间) rg_real95.20
Rg 误差 (实空间) rg_real_error2.13
I(0) (实空间) i0_real2.2520e+09
I(0) 误差 (实空间) i0_real_error4.6640e+07
Rg (倒空间) rg_reciprocal88.41
I(0) (倒空间) i0_reciprocal2226000000.0000
解质量估计 total_estimate0.8405
解质量评级 solution_quality GOOD a GOOD solution
P(r) 峰数 n_peaks2
主峰位置 r_peak_primary72.2
偏度 Skewness skewness0.330
峰度 Kurtosis kurtosis-0.792
角度范围 angular_range— – 0.0850 −1
当前正则化参数 α current_alpha1.1450
最高正则化参数 α highest_alpha99410000.0000
实空间数据点数 n_real_points18
GNOM 版本 gnom_version4.1.3
质量判据 quality_criteria AN1: 0.000; Oscil: 0.751; Stabil: 0.898; Sysdev: 1.000; Positv: 1.000; Valcen: 0.979; Smooth: 0.001

4. 晶体学与实验 4. Crystallography & Experiment

5. 实体与聚合体信息 (3)

6. 折叠分类 (SCOP + CATH) 64 domains

SCOP 2.08 (32 domains)

结构域编号 domain_idd1quna1
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.11 — PapD-like
家族 Family familyb.1.11.1 — Pilus chaperone
结构域编号 domain_idd1quna2
类 Class classb — All beta proteins
折叠类型 Fold foldb.7 — C2 domain-like
超家族 Superfamily superfamilyb.7.2 — Periplasmic chaperone C-domain
家族 Family familyb.7.2.1 — Periplasmic chaperone C-domain
结构域编号 domain_idd1qunb1
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunb2
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunc1
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.11 — PapD-like
家族 Family familyb.1.11.1 — Pilus chaperone
结构域编号 domain_idd1qunc2
类 Class classb — All beta proteins
折叠类型 Fold foldb.7 — C2 domain-like
超家族 Superfamily superfamilyb.7.2 — Periplasmic chaperone C-domain
家族 Family familyb.7.2.1 — Periplasmic chaperone C-domain
结构域编号 domain_idd1qund1
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qund2
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qune1
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.11 — PapD-like
家族 Family familyb.1.11.1 — Pilus chaperone
结构域编号 domain_idd1qune2
类 Class classb — All beta proteins
折叠类型 Fold foldb.7 — C2 domain-like
超家族 Superfamily superfamilyb.7.2 — Periplasmic chaperone C-domain
家族 Family familyb.7.2.1 — Periplasmic chaperone C-domain
结构域编号 domain_idd1qunf1
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunf2
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qung1
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.11 — PapD-like
家族 Family familyb.1.11.1 — Pilus chaperone
结构域编号 domain_idd1qung2
类 Class classb — All beta proteins
折叠类型 Fold foldb.7 — C2 domain-like
超家族 Superfamily superfamilyb.7.2 — Periplasmic chaperone C-domain
家族 Family familyb.7.2.1 — Periplasmic chaperone C-domain
结构域编号 domain_idd1qunh1
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunh2
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1quni1
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.11 — PapD-like
家族 Family familyb.1.11.1 — Pilus chaperone
结构域编号 domain_idd1quni2
类 Class classb — All beta proteins
折叠类型 Fold foldb.7 — C2 domain-like
超家族 Superfamily superfamilyb.7.2 — Periplasmic chaperone C-domain
家族 Family familyb.7.2.1 — Periplasmic chaperone C-domain
结构域编号 domain_idd1qunj1
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunj2
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunk1
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.11 — PapD-like
家族 Family familyb.1.11.1 — Pilus chaperone
结构域编号 domain_idd1qunk2
类 Class classb — All beta proteins
折叠类型 Fold foldb.7 — C2 domain-like
超家族 Superfamily superfamilyb.7.2 — Periplasmic chaperone C-domain
家族 Family familyb.7.2.1 — Periplasmic chaperone C-domain
结构域编号 domain_idd1qunl1
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunl2
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunm1
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.11 — PapD-like
家族 Family familyb.1.11.1 — Pilus chaperone
结构域编号 domain_idd1qunm2
类 Class classb — All beta proteins
折叠类型 Fold foldb.7 — C2 domain-like
超家族 Superfamily superfamilyb.7.2 — Periplasmic chaperone C-domain
家族 Family familyb.7.2.1 — Periplasmic chaperone C-domain
结构域编号 domain_idd1qunn1
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunn2
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1quno1
类 Class classb — All beta proteins
折叠类型 Fold foldb.1 — Immunoglobulin-like beta-sandwich
超家族 Superfamily superfamilyb.1.11 — PapD-like
家族 Family familyb.1.11.1 — Pilus chaperone
结构域编号 domain_idd1quno2
类 Class classb — All beta proteins
折叠类型 Fold foldb.7 — C2 domain-like
超家族 Superfamily superfamilyb.7.2 — Periplasmic chaperone C-domain
家族 Family familyb.7.2.1 — Periplasmic chaperone C-domain
结构域编号 domain_idd1qunp1
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits
结构域编号 domain_idd1qunp2
类 Class classb — All beta proteins
折叠类型 Fold foldb.2 — Common fold of diphtheria toxin/transcription factors/cytochrome f
超家族 Superfamily superfamilyb.2.3 — Bacterial adhesins
家族 Family familyb.2.3.2 — Pilus subunits

CATH v4.4 (32 domains)

结构域编号 domain_id1qunA01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunA02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunB01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunB02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunC01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunC02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunD01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunD02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunE01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunE02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunF01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunF02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunG01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunG02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunH01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunH02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunI01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunI02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunJ01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunJ02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunK01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunK02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunL01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunL02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunM01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunM02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunN01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunN02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunO01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunO02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id1qunP01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain
结构域编号 domain_id1qunP02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily1090 — Fimbrial-type adhesion domain

7. 引用文献 (1)

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