1ufa

Crystal structure of TT1467 from Thermus thermophilus HB8

Method: X-RAY DIFFRACTION
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

TT1467 protein

Thermus thermophilus

UniProt P84162

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name P84162_THETH
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–520; UniProt 1–520

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id1ufa
Deposition date deposition_date2003-05-28
Structure title titleCrystal structure of TT1467 from Thermus thermophilus HB8
Keywords keywordsstructural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION; STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Experimental Method methodX-RAY DIFFRACTION
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1ufa__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1ufa__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1ufa__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)24.13 Å
Rg (electron density)22.84 Å
Total Rg23.78 Å
Atom count4116
Residues501
Excluded volume72708 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1ufa__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (2)

▼

6. Fold Classification (SCOP + CATH) 4 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd1ufaa1
Class classa — All alpha proteins
Fold Fold folda.8 — immunoglobulin/albumin-binding domain-like
Superfamily Superfamily superfamilya.8.3 — Families 57/38 glycoside transferase middle domain
Family Family familya.8.3.3 — AmyC C-terminal domain-like
Domain ID domain_idd1ufaa2
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.6 — 7-stranded beta/alpha barrel
Superfamily Superfamily superfamilyc.6.2 — Glycoside hydrolase/deacetylase
Family Family familyc.6.2.4 — AmyC N-terminal domain-like

CATH v4.4 (2 domains)

Domain ID domain_id1ufaA01
Class class3 — Alpha Beta
Architecture architecture20 — Alpha-Beta Barrel
Topology topology110 — 7-stranded beta/alpha barrel
Homologous superfamily homologous superfamily10 — Glycoside hydrolase 38, N terminal domain
Domain ID domain_id1ufaA02
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology1430 — immunoglobulin/albumin-binding domain-like
Homologous superfamily homologous superfamily10 — Families 57/38 glycoside transferase, middle domain
▶

7. Citations (1)