Aquifex aeolicus
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白–RNA | 单体 | 蛋白 1 RNA 1 | RNA (75-MER) × 1 DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER × 1 water × 2 | 与全部聚合物一致 |
| 2 | 蛋白–RNA | 单体 | 蛋白 1 RNA 1 | RNA (75-MER) × 1 DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER × 1 water × 2 | 与全部聚合物一致 |
| UniProt名称 | O66728_AQUAE |
| Isoform | — |
| PDB实体 | 2 |
| 链与序列区间 | 作者链 A； PDB构建体 2–383； UniProt 443–824 作者链 B； PDB构建体 2–383； UniProt 443–824 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 1vfg |
| 沉积日期 deposition_date | 2004-04-13 |
| 结构标题 title | Crystal structure of tRNA nucleotidyltransferase complexed with a primer tRNA and an incoming ATP analog |
| 关键词 keywords | TRANSFERASE, RNA, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, TRANSFERASE-RNA COMPLEX; TRANSFERASE/RNA |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 25.22 Å |
| Rg（电子密度） | 24.71 Å |
| 总 Rg | 25.51 Å |
| 原子数 | 3525 |
| 残基数 | 373 |
| 排除体积 | 61316 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d1vfga1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.173 — Poly A polymerase C-terminal region-like |
| 超家族 Superfamily superfamily | a.173.1 — Poly A polymerase C-terminal region-like |
| 家族 Family family | a.173.1.1 — Poly A polymerase C-terminal region-like |
| 结构域编号 domain_id | d1vfga2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.218 — Nucleotidyltransferase |
| 超家族 Superfamily superfamily | d.218.1 — Nucleotidyltransferase |
| 家族 Family family | d.218.1.4 — Poly A polymerase head domain-like |
| 结构域编号 domain_id | d1vfgb1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.173 — Poly A polymerase C-terminal region-like |
| 超家族 Superfamily superfamily | a.173.1 — Poly A polymerase C-terminal region-like |
| 家族 Family family | a.173.1.1 — Poly A polymerase C-terminal region-like |
| 结构域编号 domain_id | d1vfgb2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.218 — Nucleotidyltransferase |
| 超家族 Superfamily superfamily | d.218.1 — Nucleotidyltransferase |
| 家族 Family family | d.218.1.4 — Poly A polymerase head domain-like |
| 结构域编号 domain_id | d1vfgb3 |
| 类 Class class | l — Artifacts |
| 折叠类型 Fold fold | l.1 — Tags |
| 超家族 Superfamily superfamily | l.1.1 — Tags |
| 家族 Family family | l.1.1.1 — Tags |
| 结构域编号 domain_id | 1vfgA01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 460 — Beta Polymerase; domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Beta Polymerase, domain 2 |
| 结构域编号 domain_id | 1vfgA02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 3090 — cca-adding enzyme, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 10 — cca-adding enzyme, domain 2 |
| 结构域编号 domain_id | 1vfgB01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 460 — Beta Polymerase; domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Beta Polymerase, domain 2 |
| 结构域编号 domain_id | 1vfgB02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 3090 — cca-adding enzyme, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 10 — cca-adding enzyme, domain 2 |