1wdi

Crystal Structure Of TT0907 From Thermus Thermophilus HB8

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

hypothetical protein TT0907

Thermus thermophilus

UniProt Q72JS5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 CITRIC ACID × 1 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name QUEA_THET2
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–345; UniProt 1–345

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1wdi
Deposition date deposition_date2004-05-17
Structure title titleCrystal Structure Of TT0907 From Thermus Thermophilus HB8
Keywords keywordsStructural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, unknown function; Structural genomics, unknown function
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1wdi__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1wdi__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1wdi__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)22.80 Å
Rg (electron density)21.65 Å
Total Rg22.34 Å
Atom count2191
Residues294
Excluded volume38803 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1wdi__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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6. Fold Classification (SCOP + CATH) 3 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1wdia_
Class classe — Multi-domain proteins (alpha and beta)
Fold Fold folde.53 — QueA-like
Superfamily Superfamily superfamilye.53.1 — QueA-like
Family Family familye.53.1.1 — QueA-like

CATH v4.4 (2 domains)

Domain ID domain_id1wdiA01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology1780 — QueA-like
Homologous superfamily homologous superfamily10 — QueA-like
Domain ID domain_id1wdiA02
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology10 — Thrombin, subunit H
Homologous superfamily homologous superfamily240 — QueA-like
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7. Citations (1)