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1wne

Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with a template-primer RNA

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

RNA-dependent RNA polymerase

Foot-and-mouth disease virus

UniProt Q9QCE4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Monomer Protein 1 RNA 2 5'-R(*CP*AP*UP*GP*GP*GP*CP*C)-3' × 1 5'-R(*GP*GP*CP*CP*C)-3' × 1 MAGNESIUM ION × 1 water × 2 Consistent with all polymers

Other States of the Same Protein in the Database

Monomer
1u09 3nky

2 assemblies

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
1wne 3nl0 4iqx

3 assemblies

View Construct and Data Evidence
UniProt name Q9QCE4_9PICO
Isoform —
PDB entities 3
Chains and sequence ranges Author chain A； PDBConstruct 1–470； UniProt 1858–2327

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1wne
Deposition date deposition_date2004-07-31
Structure title titleFoot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with a template-primer RNA
Keywords keywordsPROTEIN-DNA COMPLEX, Foot and Mouth Disease Virus, RNA-dependent RNA polymerase, TRANSFERASE-RNA COMPLEX; TRANSFERASE/RNA
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1wne__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1wne__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1wne__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）23.41 Å
Rg (electron density)22.71 Å
Total Rg23.43 Å
Atom count3989
Residues489
Excluded volume69816 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1wne__assembly_1__model_1 trimeric （3） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (5)

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6. Fold Classification (SCOP + CATH) 4 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd1wnea1
Class classe — Multi-domain proteins (alpha and beta)
Fold Fold folde.8 — DNA/RNA polymerases
Superfamily Superfamily superfamilye.8.1 — DNA/RNA polymerases
Family Family familye.8.1.4 — RNA-dependent RNA-polymerase
Domain ID domain_idd1wnea2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags

CATH v4.4 (2 domains)

Domain ID domain_id1wneA02
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology70 — Alpha-Beta Plaits
Homologous superfamily homologous superfamily270 — Reverse transcriptase/Diguanylate cyclase domain
Domain ID domain_id1wneA03
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology960 — Mitochondrial Import Receptor Subunit Tom20; Chain A
Homologous superfamily homologous superfamily20 —
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7. Citations (1)