Escherichia coli
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | water × 1 | Consistent with protein count |
| UniProt name | YGFY_ECOLI |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 4–91； UniProt 1–88 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 1x6j |
| Deposition date deposition_date | 2004-08-11 |
| Structure title title | Crystal structure of ygfY from Escherichia coli |
| Keywords keywords | structural genomics, ygfY, hypothetical protein, transcriptional regulation, Structure 2 Function Project, S2F, UNKNOWN FUNCTION; STRUCTURAL GENOMICS, UNKNOWN FUNCTION |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 13.89 Å |
| Rg (electron density) | 12.54 Å |
| Total Rg | 13.86 Å |
| Atom count | 737 |
| Residues | 88 |
| Excluded volume | 13001 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d1x6ja_ |
| Class class | a — All alpha proteins |
| Fold Fold fold | a.218 — YgfY-like |
| Superfamily Superfamily superfamily | a.218.1 — YgfY-like |
| Family Family family | a.218.1.0 — automated matches |
| Domain ID domain_id | 1x6jA00 |
| Class class | 1 — Mainly Alpha |
| Architecture architecture | 10 — Orthogonal Bundle |
| Topology topology | 150 — DNA polymerase; domain 1 |
| Homologous superfamily homologous superfamily | 250 — Flavinator of succinate dehydrogenase |